RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 ISL1P61371 349 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 SLC35A2P78381 396 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 BDH1Q02338 343 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 ZNF85Q03923 595 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 ATP6AP1Q15904 470 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 ABCA11PQ4W5N1 156 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 SPIN3Q5JUX0 258 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 C10orf99Q6UWK7 81 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 RTN4RL2Q86UN3 420 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 ZNF596Q8TC21 504 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 RNF166Q96A37 237 aaPredicted RBP9.89□□□□□ -0.83
CPSF3-204ENST00000489403 AKR1E2Q96JD6 320 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 SLC25A33Q9BSK2 321 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 GABARAPL1Q9H0R8 117 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 GAL3ST2Q9H3Q3 398 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 HMG20AQ9NP66 347 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 GSTK1Q9Y2Q3 226 aa9.89□□□□□ -0.83
CPSF3-204ENST00000489403 TRGV10A0A0A0MS01 117 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 IGKV1-12A0A0C4DH73 117 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 OR2F2O95006 317 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 OR2H2O95918 312 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 CYB5AP00167 134 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 IGKV1D-12P01611 117 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 AMY1AP04745 511 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 AMY2AP04746 511 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 ATF1P18846 271 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 BRS3P32247 399 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 POLR2IP36954 125 aaKnown RBP9.88□□□□□ -0.83
CPSF3-204ENST00000489403 CDC42P60953 191 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 PDZK1IP1Q13113 114 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 TP53I3Q53FA7 332 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 VAX1Q5SQQ9 334 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 OR52W1Q6IF63 320 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 HEPN1Q6WQI6 88 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 LHFPL2Q6ZUX7 228 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 OR4X2Q8NGF9 303 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 CAPSLQ8WWF8 208 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 CORO2AQ92828 525 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 STMN2Q93045 179 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 RFT1Q96AA3 541 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 RCC1LQ96I51 464 aaKnown RBP9.88□□□□□ -0.83
CPSF3-204ENST00000489403 RBM14Q96PK6 669 aaKnown RBP9.88□□□□□ -0.83
CPSF3-204ENST00000489403 CIB1Q99828 191 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 ZNF286AQ9HBT8 521 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 EXOSC4Q9NPD3 245 aaKnown RBP9.88□□□□□ -0.83
CPSF3-204ENST00000489403 TAS2R3Q9NYW6 316 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.88□□□□□ -0.83
CPSF3-204ENST00000489403 GLS2Q9UI32 602 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 GNG8Q9UK08 70 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 HHLA2Q9UM44 414 aa9.88□□□□□ -0.83
CPSF3-204ENST00000489403 LEUTXA8MZ59 168 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 SH2D1BO14796 132 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 PRKACBP22694 351 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 LMO1P25800 156 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 CD34P28906 385 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 GLIPR1P48060 266 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 ARHGDIBP52566 201 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 MTCP1P56278 107 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 KRTAP10-11P60412 298 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 AESQ08117 197 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 HLA-DRB5Q30154 266 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 KIAA2026Q5HYC2 2103 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 KHDC1LQ5JSQ8 128 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 C11orf87Q6NUJ2 197 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 UTS2BQ765I0 119 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 RNF144BQ7Z419 303 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 FAM220AQ7Z4H9 259 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 AMIGO2Q86SJ2 522 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 ZDHHC13Q8IUH4 622 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 BCAS4Q8TDM0 211 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 FGGYQ96C11 551 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 OPALINQ96PE5 141 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 COMMD4Q9H0A8 199 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 INPP5EQ9NRR6 644 aa9.87□□□□□ -0.83
CPSF3-204ENST00000489403 DNAH9Q9NYC9 4486 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 WI2-2373I1.2A0A1W2PRP0 233 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 FUOMA2VDF0 154 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 LY6LH3BQJ8 138 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 BUB1B-PAK6H3BSN5 160 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 KDM4BO94953 1096 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 DUS4LO95620 317 aaKnown RBP9.86□□□□□ -0.83
CPSF3-204ENST00000489403 CSN2P05814 226 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 ZNF20P17024 532 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 ATP6V1E1P36543 226 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 PTGFRP43088 359 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 UTF1Q5T230 341 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 TPTE2P1Q5T6R2 138 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 TMEM244Q5VVB8 128 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 OR51A4Q8NGJ6 313 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 OR5D18Q8NGL1 313 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 OR8J1Q8NGP2 316 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 OR2G2Q8NGZ5 317 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 OR10AC1Q8NH08 325 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 EME1Q96AY2 570 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 SPSB1Q96BD6 273 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 COQ2Q96H96 371 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 SPACA5Q96QH8 159 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 MBOAT4Q96T53 435 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 GABARAPL3Q9BY60 117 aa9.86□□□□□ -0.83
CPSF3-204ENST00000489403 FRRS1LQ9P0K9 344 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms