RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 S1PR3Q99500 378 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 CGREF1Q99674 301 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 KRT84Q9NSB2 600 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 THAP1Q9NVV9 213 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 ZNF107Q9UII5 783 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-233ENST00000489352 ZNF580Q9UK33 172 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 DNAH17Q9UFH2 4485 aa8.75□□□□□ -1.01
HDAC6-233ENST00000489352 IGHV3-72A0A0B4J1Y9 119 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 OR11H12B2RN74 326 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 G3V318 75 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 J3QR06 171 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 IGLV1-40P01703 118 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 H2AFXP16104 143 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-233ENST00000489352 ERP29P30040 261 aaKnown RBP8.74□□□□□ -1.01
HDAC6-233ENST00000489352 PPIFP30405 207 aaKnown RBP8.74□□□□□ -1.01
HDAC6-233ENST00000489352 NPBWR2P48146 333 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 RIPPLY1Q0D2K3 151 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 BNIP1Q12981 228 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 GALEQ14376 348 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 SLC35F1Q5T1Q4 408 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 ASRGL1Q7L266 308 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 CYP4Z1Q86W10 505 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 OR10X1Q8NGY0 326 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 FANK1Q8TC84 345 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 THAP7Q9BT49 309 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-233ENST00000489352 LGALS13Q9UHV8 139 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 ERGIC3Q9Y282 383 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 PIGLQ9Y2B2 252 aa8.74□□□□□ -1.01
HDAC6-233ENST00000489352 TRAV41A0A0B4J266 112 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 IDH3BO43837 385 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 INMTO95050 263 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 HAND1O96004 215 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 MOSP00540 346 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 NRASP01111 189 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 IGHV3-11P01762 117 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 IGHV3-7P01780 117 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 IGHA1P01876 353 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 GAPDHP04406 335 aaKnown RBP8.73□□□□□ -1.01
HDAC6-233ENST00000489352 PSKH1P11801 424 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 ATF4P18848 351 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-233ENST00000489352 GLIPR1P48060 266 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 TCTAP57738 103 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 FXYD6P3P58550 94 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 SELENOWP63302 87 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 ZNF45Q02386 682 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 RAB40BQ12829 278 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 EBI3Q14213 229 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 DIAPH2-AS1Q14236 149 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 OR8H1Q8NGG4 311 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 OR52N4Q8NGI2 321 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 ZBTB9Q96C00 473 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 BARHL1Q9BZE3 327 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 TINAGL1Q9GZM7 467 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-233ENST00000489352 PARP11Q9NR21 331 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 TPSG1Q9NRR2 321 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 CD300AQ9UGN4 299 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 SNX13Q9Y5W8 968 aa8.73□□□□□ -1.01
HDAC6-233ENST00000489352 A0A087X0M5 115 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 A0A1B0GX30 115 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 FFAR1O14842 300 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 ANGPT2O15123 496 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 ZP3P21754 424 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 BMI1P35226 326 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 TMEM177Q53S58 311 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 TEX30Q5JUR7 227 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 ENTHD1Q8IYW4 607 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 ZNF511Q8NB15 262 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 RNF133Q8WVZ7 376 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 CORO2AQ92828 525 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 CEP19Q96LK0 163 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 OR52D1Q9H346 318 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 ANKRD19PQ9H560 264 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 DCAF13Q9NV06 445 aaKnown RBP8.72□□□□□ -1.01
HDAC6-233ENST00000489352 FBXO7Q9Y3I1 522 aa8.72□□□□□ -1.01
HDAC6-233ENST00000489352 IGHV1-3A0A0C4DH29 117 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 HSD17B6O14756 317 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 RBMY1A1P0DJD3 496 aaKnown RBP8.71□□□□□ -1.02
HDAC6-233ENST00000489352 SLC2A2P11168 524 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-233ENST00000489352 CD40LGP29965 261 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 KDELR2P33947 212 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 OMPP47874 163 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 REG1BP48304 166 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 MRPL19P49406 292 aaKnown RBP8.71□□□□□ -1.02
HDAC6-233ENST00000489352 GNG10P50151 68 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 ERVK11-1P61568 191 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 IL24Q13007 206 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 TATDN3Q17R31 274 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 ERICH5Q6P6B1 374 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 ANGPTL5Q86XS5 388 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 IZUMO1Q8IYV9 350 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 Q8N6K4 173 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 GVQW1Q8N7I0 195 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 OR9G4Q8NGQ1 327 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 OR6K6Q8NGW6 343 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 C2CD4CQ8TF44 421 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 EMG1Q92979 244 aaKnown RBP8.71□□□□□ -1.02
HDAC6-233ENST00000489352 LEAP2Q969E1 77 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 SH3GL1Q99961 368 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 ABHD6Q9BV23 337 aa8.71□□□□□ -1.02
HDAC6-233ENST00000489352 A0A1W2PN81 502 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms