RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 LINC00596Q86U02 117 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 H1FOOQ8IZA3 346 aaPredicted RBP2.52□□□□□ -2.01
XRN1-213ENST00000489241 FAM9CQ8IZT9 166 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 ZDHHC22Q8N966 263 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 OR5AK3PQ8NH89 298 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 DYNC2LI1Q8TCX1 351 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 RTN4IP1Q8WWV3 396 aaPredicted RBP2.52□□□□□ -2.01
XRN1-213ENST00000489241 WDR34Q96EX3 536 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 IP6K3Q96PC2 410 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 TAPBPLQ9BX59 468 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 API5Q9BZZ5 524 aaKnown RBP2.52□□□□□ -2.01
XRN1-213ENST00000489241 LINC00574Q9H8X3 128 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 RWDD2AQ9UIY3 292 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 FBXL3Q9UKT7 428 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 SLC22A14Q9Y267 594 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 ZNF706Q9Y5V0 76 aaPredicted RBP2.52□□□□□ -2.01
XRN1-213ENST00000489241 S4R3C0 116 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 C2orf16Q68DN1 1984 aa2.52□□□□□ -2.01
XRN1-213ENST00000489241 MYBPHLA2RUH7 354 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 PGPA6NDG6 321 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 FABP12A6NFH5 140 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 COLCA2A8K830 154 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 H3BP45 60 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 TOX3O15405 576 aaPredicted RBP2.51□□□□□ -2.01
XRN1-213ENST00000489241 SLC37A4O43826 429 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 COX7A2P2O60397 106 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 PDCD6O75340 191 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 WISP3O95389 354 aaPredicted RBP2.51□□□□□ -2.01
XRN1-213ENST00000489241 IL4P05112 153 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 CECR9P0C854 216 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 SLC2A1P11166 492 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 IMPA1P29218 277 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 CD40LGP29965 261 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 MPIP34949 423 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 LINC00315P59091 139 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 MOBPQ13875 183 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 UBE2NLQ5JXB2 153 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 GLYATQ6IB77 296 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 PRSS54Q6PEW0 395 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 TRMT10CQ7L0Y3 403 aaKnown RBP2.51□□□□□ -2.01
XRN1-213ENST00000489241 MIR7-3HGQ8N6C7 128 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 ZNF709Q8N972 641 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 ST20-AS1Q8NBB2 130 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 OR5H2Q8NGV7 314 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 OR6K3Q8NGY3 331 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 DDIT4LQ96D03 193 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 FAM210AQ96ND0 272 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 LINC01587Q99440 93 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 APOL4Q9BPW4 351 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 C7orf50Q9BRJ6 194 aaKnown RBP2.51□□□□□ -2.01
XRN1-213ENST00000489241 SLC25A31Q9H0C2 315 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 WDR54Q9H977 334 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 RDH14Q9HBH5 336 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 ATP6V1DQ9Y5K8 247 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 ZNF780BQ9Y6R6 833 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 SLIT3O75094 1523 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 ANKRD12Q6UB98 2062 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 DOCK8Q8NF50 2099 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 DOCK9Q9BZ29 2069 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 ARID1AO14497 2285 aa2.51□□□□□ -2.01
XRN1-213ENST00000489241 MYO10Q9HD67 2058 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 TMEM150BA6NC51 233 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 CEACAM18A8MTB9 384 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 C9J4A7 227 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 C9JQL5 133 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 ITGB1BP1O14713 200 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 ADAP1O75689 374 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 RAB36O95755 333 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 CA2P00918 260 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 PSMB9P28065 219 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 NIPAL1Q6NVV3 410 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 FA2HQ7L5A8 372 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 C10orf107Q8IVU9 208 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 FXYD5Q96DB9 178 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 TMEM56Q96MV1 263 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 YPEL4Q96NS1 127 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 FAAP24Q9BTP7 215 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 TSGA10Q9BZW7 698 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 ZNF436Q9C0F3 470 aaPredicted RBP2.5□□□□□ -2.01
XRN1-213ENST00000489241 HDHD2Q9H0R4 259 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 DHX35Q9H5Z1 703 aaKnown RBP2.5□□□□□ -2.01
XRN1-213ENST00000489241 METTL17Q9H7H0 456 aaPredicted RBP2.5□□□□□ -2.01
XRN1-213ENST00000489241 RHOFQ9HBH0 211 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 IMP3Q9NV31 184 aaKnown RBP2.5□□□□□ -2.01
XRN1-213ENST00000489241 TMEM38BQ9NVV0 291 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 TAC3Q9UHF0 121 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 YEATS2Q9ULM3 1422 aa2.5□□□□□ -2.01
XRN1-213ENST00000489241 NUP214P35658 2090 aaPredicted RBP2.49□□□□□ -2.01
XRN1-213ENST00000489241 RAD50Q92878 1312 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 IGLV3-12A0A075B6K2 115 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 TRAV8-3A0A0A6YYJ7 113 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 C1orf232A0A0U1RR37 186 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 LRCOL1A6NCL2 159 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 FAM183AA6NL82 134 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 CD300LBA8K4G0 201 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 PRAMEF26H0Y7S4 382 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 I3L4J1 428 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 SYNGR1O43759 233 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 SOD3P08294 240 aa2.49□□□□□ -2.01
XRN1-213ENST00000489241 OCMP0CE72 109 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms