RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 HES1Q14469 280 aa12.67□□□□□ -0.38
USP48-210ENST00000489108 ZNF829Q3KNS6 432 aaPredicted RBP12.67□□□□□ -0.38
USP48-210ENST00000489108 CD300LDQ6UXZ3 194 aa12.67□□□□□ -0.38
USP48-210ENST00000489108 SLC25A26Q70HW3 274 aa12.67□□□□□ -0.38
USP48-210ENST00000489108 CORO2AQ92828 525 aa12.67□□□□□ -0.38
USP48-210ENST00000489108 YIPF3Q9GZM5 350 aa12.67□□□□□ -0.38
USP48-210ENST00000489108 TAS2R3Q9NYW6 316 aa12.67□□□□□ -0.38
USP48-210ENST00000489108 FGF16O43320 207 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 SRSF10O75494 262 aaKnown RBP12.66□□□□□ -0.38
USP48-210ENST00000489108 MRPL3P09001 348 aaKnown RBP12.66□□□□□ -0.38
USP48-210ENST00000489108 SLC2A5P22732 501 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 GLIPR1P48060 266 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 NPBWR2P48146 333 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 SNU13P55769 128 aaKnown RBP12.66□□□□□ -0.38
USP48-210ENST00000489108 GINS1Q14691 196 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 UBE2V2Q15819 145 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 CXorf66Q5JRM2 361 aaPredicted RBP12.66□□□□□ -0.38
USP48-210ENST00000489108 SLC35D3Q5M8T2 416 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 ENTHD1Q8IYW4 607 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 DRAM1Q8N682 238 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 RPEQ96AT9 228 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 CMTM5Q96DZ9 223 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 GLS2Q9UI32 602 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 IKZF2Q9UKS7 526 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 COPS3Q9UNS2 423 aa12.66□□□□□ -0.38
USP48-210ENST00000489108 SAMHD1Q9Y3Z3 626 aaKnown RBP12.66□□□□□ -0.38
USP48-210ENST00000489108 LOC110117498-PIK3R3F6TDL0 507 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 SIRPB1O00241 398 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 MAGEB4O15481 346 aaPredicted RBP12.65□□□□□ -0.38
USP48-210ENST00000489108 AESQ08117 197 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 GPR50Q13585 617 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 APOFQ13790 326 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 Q6ZSR3 168 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 ELMOD2Q8IZ81 293 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 OR4D6Q8NGJ1 314 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 TOMM40LQ969M1 308 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 APOL4Q9BPW4 351 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 RBFOX1Q9NWB1 397 aaKnown RBP12.65□□□□□ -0.38
USP48-210ENST00000489108 OR52A1Q9UKL2 312 aa12.65□□□□□ -0.38
USP48-210ENST00000489108 SIRT4Q9Y6E7 314 aaPredicted RBP12.65□□□□□ -0.38
USP48-210ENST00000489108 A0A087X0M5 115 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 A0A1B0GX30 115 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 H3BSH0 61 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 CCRL2O00421 344 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 ENTPD6O75354 484 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 BCL3P20749 454 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 NFYBP25208 207 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 MAGEA2P43356 314 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 DIAPH2-AS1Q14236 149 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 ZNF146Q15072 292 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 BCL2L15Q5TBC7 163 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 CYP2R1Q6VVX0 501 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 FAM58AQ8N1B3 248 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 OR10G2Q8NGC3 310 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 HRASLS5Q96KN8 279 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 FEVQ99581 238 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 REEP1Q9H902 201 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 PCDHB16Q9NRJ7 776 aa12.64□□□□□ -0.39
USP48-210ENST00000489108 A0A1W2PPI3 338 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 DHRS7CA6NNS2 312 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 AP4M1O00189 453 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 E2F6O75461 281 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 IGKV1D-33P01593 117 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 IGKV1-33P01594 117 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 IGHV3-7P01780 117 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 HMGN1P05114 100 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 HCKP08631 526 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 PRKACAP17612 351 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 PTGFRP43088 359 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 INSL3P51460 131 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 FUT6P51993 359 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 FOXE3Q13461 319 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 FHL3Q13643 280 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 C17orf58Q2M2W7 97 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 OR2T5Q6IEZ7 315 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 PLEKHG7Q6ZR37 379 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 Q8IYB0 196 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 RNF152Q8N8N0 203 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 OR11H1Q8NG94 326 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 OR2T29Q8NH02 315 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 OR9G1Q8NH87 305 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 ASB17Q8WXJ9 295 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 RNFT2Q96EX2 444 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 EDA2RQ9HAV5 297 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 ING3Q9NXR8 418 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 R4GMQ9 66 aa12.63□□□□□ -0.39
USP48-210ENST00000489108 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 FUOMA2VDF0 154 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 ELANEP08246 267 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 GPR12P47775 334 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 CDC42P60953 191 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 FAM27D1Q5T7N8 215 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 C16orf89Q6UX73 402 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 HDXQ7Z353 690 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 C4orf3Q8WVX3 66 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 LEAP2Q969E1 77 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 ISOC1Q96CN7 298 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 GON7Q9BXV9 100 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 MOB1AQ9H8S9 216 aa12.62□□□□□ -0.39
USP48-210ENST00000489108 TMEM14AQ9Y6G1 99 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms