RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TSEN15Q8WW01 171 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 PPA2Q9H2U2 334 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 ISG20L2Q9H9L3 353 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 HMG20AQ9NP66 347 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 AMBNQ9NP70 447 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 EXOSC4Q9NPD3 245 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 DHDHQ9UQ10 334 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 TMEM82A0PJX8 343 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 IRGMA1A4Y4 181 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 FUOMA2VDF0 154 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 SH2D1BO14796 132 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 MGST3O14880 152 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 SULT1B1O43704 296 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 KDM4BO94953 1096 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 HCKP08631 526 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 IGHV1-8P0DP01 117 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 PROK1P58294 105 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 RFT1Q96AA3 541 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 JAM3Q9BX67 310 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 CHST6Q9GZX3 395 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 RANBP3Q9H6Z4 567 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 SCN3BQ9NY72 215 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 IL36RNQ9UBH0 155 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 LRRC42Q9Y546 428 aa11.22□□□□□ -0.61
SPTLC1-207ENST00000488921 ODF3BA8MYP8 253 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 ZFPL1O95159 310 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 ARG1P05089 322 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 DCKP27707 260 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 ERP29P30040 261 aaKnown RBP11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 SNU13P55769 128 aaKnown RBP11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 LY6EQ16553 131 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 CCDC58Q4VC31 144 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 ZNF626Q68DY1 528 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 C11orf88Q6PI97 169 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 TRAPPC6BQ86SZ2 158 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 PARP16Q8N5Y8 322 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 OR11H6Q8NGC7 330 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 OR4C13Q8NGP0 309 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 CNIH3Q8TBE1 160 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 C17orf50Q8WW18 174 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 APH1BQ8WW43 257 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 AJUBAQ96IF1 538 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 SPACA5Q96QH8 159 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 PDCD1LG2Q9BQ51 273 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 ZNF649Q9BS31 505 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 TCF7L1Q9HCS4 588 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 FGF20Q9NP95 211 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 ABCB10Q9NRK6 738 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 GSTK1Q9Y2Q3 226 aa11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 UBE2J1Q9Y385 318 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1-207ENST00000488921 CMYA5Q8N3K9 4069 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 TET2Q6N021 2002 aaPredicted RBP11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 FAM90A8PA6NJQ4 464 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 VGLL3A8MV65 326 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 SIRPB1O00241 398 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 MAGEB3O15480 346 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 PSPNO60542 156 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 OR2H2O95918 312 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 CD2P06729 351 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 DUSP1P28562 367 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 GABRA5P31644 462 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 OR3A1P47881 315 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 P2RX3P56373 397 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 SRSF4Q08170 494 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 KISS1Q15726 138 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 C6orf141Q5SZD1 244 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 TMPRSS11AQ6ZMR5 421 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 TCF23Q7RTU1 214 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 CHST4Q8NCG5 386 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 BPIFB6Q8NFQ5 453 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 OR52N4Q8NGI2 321 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 OR5D18Q8NGL1 313 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 MALSU1Q96EH3 234 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 GAL3ST2Q9H3Q3 398 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 FBLN5Q9UBX5 448 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 PITPNC1Q9UKF7 332 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 SESN1Q9Y6P5 492 aa11.2□□□□□ -0.62
SPTLC1-207ENST00000488921 MGAM2Q2M2H8 2515 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 PKD1L1Q8TDX9 2849 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 TRGV10A0A0A0MS01 117 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 IGKV1-12A0A0C4DH73 117 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 MEX3AA1L020 520 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 WBP4O75554 376 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 IGKV1D-12P01611 117 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 CSN2P05814 226 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 LIMS3P0CW19 117 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 LIMS4P0CW20 117 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 TMEM225BP0DP42 221 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 CALCBP10092 127 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 ZNF44P15621 663 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 MYL12AP19105 171 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 RAB3AP20336 220 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 LMO1P25800 156 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 MTNR1BP49286 362 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 DYNC1I2Q13409 638 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 MINOS1Q5TGZ0 78 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 SLC35E4Q6ICL7 350 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 OR52W1Q6IF63 320 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 RPL22L1Q6P5R6 122 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 LHFPL4Q7Z7J7 247 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms