RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 ANKRD20A5PA0PJZ0 165 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 OR2AT4A6NND4 320 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 SEC14L6B5MCN3 397 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 H3BMM0 161 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 GYG2O15488 501 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 PRKACAP17612 351 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 M6PRP20645 277 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 IMPA1P29218 277 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 HTR2BP41595 481 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 IDNKQ5T6J7 187 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 C16orf87Q6PH81 154 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 ZNF773Q6PK81 442 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 CYHR1Q6ZMK1 362 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 Q6ZQT7 251 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 CA13Q8N1Q1 262 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 GAPTQ8N292 157 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 Q8NAQ8 132 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 OR8A1Q8NGG7 326 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 OR4K13Q8NH42 304 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 UBE2WQ96B02 151 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 RILPQ96NA2 401 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 OR2M4Q96R27 311 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 BEX2Q9BXY8 128 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 ZNF436Q9C0F3 470 aaPredicted RBP1.26□□□□□ -2.21
PTPN4-212ENST00000488896 GABARAPL1Q9H0R8 117 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 TUBA4BQ9H853 241 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 ZNF286AQ9HBT8 521 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 C12orf4Q9NQ89 552 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 IFNKQ9P0W0 207 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 ANXA10Q9UJ72 324 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 FLVCR2Q9UPI3 526 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 AP3M1Q9Y2T2 418 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 U3KQK5 164 aa1.26□□□□□ -2.21
PTPN4-212ENST00000488896 YLPM1P49750 1951 aaKnown RBP1.26□□□□□ -2.21
PTPN4-212ENST00000488896 MYO9BQ13459 2157 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 A0A1B0GU33 70 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 SLC5A10A0PJK1 596 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 LEUTXA8MZ59 168 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 ZNF593O00488 134 aaPredicted RBP1.25□□□□□ -2.21
PTPN4-212ENST00000488896 TCAPO15273 167 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 KDELR3O43731 214 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 SLC37A4O43826 429 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 COX7A2P2O60397 106 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 SNAI1O95863 264 aaPredicted RBP1.25□□□□□ -2.21
PTPN4-212ENST00000488896 MBP02144 154 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 CEACAM16Q2WEN9 425 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 Q499Y3 187 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 TTMPQ5BVD1 217 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 DPPA2Q7Z7J5 298 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 MARCH3Q86UD3 253 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 C3orf22Q8N5N4 141 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 ZNF321PQ8N8H1 164 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 OR10D4PQ8NGN7 298 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 CCL17Q92583 94 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 FAM131CQ96AQ9 280 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 UTP23Q9BRU9 249 aaKnown RBP1.25□□□□□ -2.21
PTPN4-212ENST00000488896 V9GYY9 64 aa1.25□□□□□ -2.21
PTPN4-212ENST00000488896 HELZ2Q9BYK8 2649 aaKnown RBP1.24□□□□□ -2.21
PTPN4-212ENST00000488896 IGKV1D-37A0A075B6S9 117 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 GATCO43716 136 aaKnown RBP1.24□□□□□ -2.21
PTPN4-212ENST00000488896 GZMAP12544 262 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 HOXB8P17481 243 aaPredicted RBP1.24□□□□□ -2.21
PTPN4-212ENST00000488896 GPR4P46093 362 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 GPR176Q14439 515 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 ATP6AP1LQ52LC2 224 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 UBE2NLQ5JXB2 153 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 CLEC12AQ5QGZ9 265 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 UGT2A3Q6UWM9 527 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 GALNT10Q86SR1 603 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 ATPAF2Q8N5M1 289 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 DNAAF3Q8N9W5 541 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 BPIFB6Q8NFQ5 453 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 OR2M3Q8NG83 312 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 CACNG8Q8WXS5 425 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 APOBEC3DQ96AK3 386 aaPredicted RBP1.24□□□□□ -2.21
PTPN4-212ENST00000488896 RAD51AP1Q96B01 352 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 FMC1Q96HJ9 113 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 ADTRPQ96IZ2 230 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 YPEL4Q96NS1 127 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 NAP1L5Q96NT1 182 aaPredicted RBP1.24□□□□□ -2.21
PTPN4-212ENST00000488896 BCL7BQ9BQE9 202 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 MAP1LC3CQ9BXW4 147 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 TSGA10Q9BZW7 698 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 POMKQ9H5K3 350 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 LRRC19Q9H756 370 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 SDHAF3Q9NRP4 125 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 OR5V1Q9UGF6 321 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 CACNA1SQ13698 1873 aa1.24□□□□□ -2.21
PTPN4-212ENST00000488896 PRRC2BQ5JSZ5 2229 aaKnown RBP1.23□□□□□ -2.21
PTPN4-212ENST00000488896 A6NED7 52 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 RBFOX3A6NFN3 312 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 PRMT5O14744 637 aaPredicted RBP1.23□□□□□ -2.21
PTPN4-212ENST00000488896 PSIP1O75475 530 aaKnown RBP1.23□□□□□ -2.21
PTPN4-212ENST00000488896 GTF2F2P13984 249 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 CTLA4P16410 223 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 HTR2CP28335 458 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 CRABP2P29373 138 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 ATP5J2P56134 94 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 BCL2A1Q16548 175 aa1.23□□□□□ -2.21
PTPN4-212ENST00000488896 ACTBL2Q562R1 376 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms