RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 ZNF329Q86UD4 541 aa12.85□□□□□ -0.35
SRRT-212ENST00000487311 MRPL41Q8IXM3 137 aaKnown RBP12.85□□□□□ -0.35
SRRT-212ENST00000487311 ENTHD1Q8IYW4 607 aa12.85□□□□□ -0.35
SRRT-212ENST00000487311 OR4X2Q8NGF9 303 aa12.85□□□□□ -0.35
SRRT-212ENST00000487311 CORO2AQ92828 525 aa12.85□□□□□ -0.35
SRRT-212ENST00000487311 UTP4Q969X6 686 aaKnown RBP12.85□□□□□ -0.35
SRRT-212ENST00000487311 ADAT3Q96EY9 351 aaPredicted RBP12.85□□□□□ -0.35
SRRT-212ENST00000487311 NRBF2Q96F24 287 aa12.85□□□□□ -0.35
SRRT-212ENST00000487311 IGKV1-12A0A0C4DH73 117 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 METTL15A6NJ78 407 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 LEUTXA8MZ59 168 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 BUB1B-PAK6H3BSN5 160 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 GATBO75879 557 aaKnown RBP12.84□□□□□ -0.35
SRRT-212ENST00000487311 DUS4LO95620 317 aaKnown RBP12.84□□□□□ -0.35
SRRT-212ENST00000487311 OR2H2O95918 312 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 IGKV1D-12P01611 117 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 KRT8P05787 483 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 CCDC159P0C7I6 412 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 BRS3P32247 399 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 KIR3DL2P43630 455 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 POU3F4P49335 361 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 RBP2P50120 134 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 C9orf152Q5JTZ5 239 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 RTN4RL2Q86UN3 420 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 ZNF596Q8TC21 504 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 DNAJC9Q8WXX5 260 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 AKR1E2Q96JD6 320 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 HMG20AQ9NP66 347 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 GSTK1Q9Y2Q3 226 aa12.84□□□□□ -0.35
SRRT-212ENST00000487311 SERPINA3P01011 423 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 OR2T7P0C7T2 308 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 LMO1P25800 156 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 CD34P28906 385 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 POLR2IP36954 125 aaKnown RBP12.83□□□□□ -0.36
SRRT-212ENST00000487311 ATP1B3P54709 279 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 MTCP1P56278 107 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 CD69Q07108 199 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 PDZK1IP1Q13113 114 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 C17orf58Q2M2W7 97 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 HLA-DRB5Q30154 266 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 TPTE2P1Q5T6R2 138 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 OR52W1Q6IF63 320 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 Q8IYB0 196 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 OSR2Q8N2R0 312 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 CAPSLQ8WWF8 208 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 RFT1Q96AA3 541 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 WWC2-AS2Q96NR7 200 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 B9D2Q9BPU9 175 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 ADI1Q9BV57 179 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 ING3Q9NXR8 418 aa12.83□□□□□ -0.36
SRRT-212ENST00000487311 TRGV10A0A0A0MS01 117 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 LOC107986453A0A1B0GWG9 222 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FAM90A18PA6NE21 464 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FAM90A16PA6NEW6 464 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FAM90A20PA6NIJ5 464 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FAM90A9PA6NNJ1 464 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FAM90A12PA8MX19 464 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FAM90A5PA8MXJ8 464 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 SH2D1BO14796 132 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 SULT1C4O75897 302 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FAM90A15PP0C7V4 464 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FAM90A13PP0C7W8 464 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FAM90A14PP0C7W9 464 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FAM90A24PP0C7X0 464 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 HOXB6P17509 224 aaKnown RBP12.82□□□□□ -0.36
SRRT-212ENST00000487311 ATF1P18846 271 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 OR3A4PP47883 348 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 THBS3P49746 956 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FLOT2Q14254 428 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 KPNB1Q14974 876 aaKnown RBP12.82□□□□□ -0.36
SRRT-212ENST00000487311 Q6P435 159 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 DNAAF1Q8NEP3 725 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 FGGYQ96C11 551 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 COQ2Q96H96 371 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 NOL4LQ96MY1 436 aaPredicted RBP12.82□□□□□ -0.36
SRRT-212ENST00000487311 SPACA5Q96QH8 159 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 KRT84Q9NSB2 600 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 TAS2R3Q9NYW6 316 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.82□□□□□ -0.36
SRRT-212ENST00000487311 POMPQ9Y244 141 aa12.82□□□□□ -0.36
SRRT-212ENST00000487311 PSMB11A5LHX3 300 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 CDC42P60953 191 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 ISL1P61371 349 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 ZNF85Q03923 595 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 SCN1BQ07699 218 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 SPIN3Q5JUX0 258 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 KDM4DQ6B0I6 523 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 GID4Q8IVV7 300 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 CCDC197Q8NCU1 140 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 CCDC54Q8NEL0 328 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 OR10H4Q8NGA5 316 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 PP6455Q8WZ26 134 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 C10orf35Q96D05 121 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 ZNF649Q9BS31 505 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 GAL3ST2Q9H3Q3 398 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 EXOSC4Q9NPD3 245 aaKnown RBP12.81□□□□□ -0.36
SRRT-212ENST00000487311 FRRS1LQ9P0K9 344 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 WARS2Q9UGM6 360 aaKnown RBP12.81□□□□□ -0.36
SRRT-212ENST00000487311 GLS2Q9UI32 602 aa12.81□□□□□ -0.36
SRRT-212ENST00000487311 LINC00527Q9UJ94 153 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms