RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 GLS2Q9UI32 602 aa19.76■□□□□ 0.75
LIME1-206ENST00000487026 PITPNC1Q9UKF7 332 aa19.76■□□□□ 0.75
LIME1-206ENST00000487026 HHLA2Q9UM44 414 aa19.76■□□□□ 0.75
LIME1-206ENST00000487026 EXOGQ9Y2C4 368 aaKnown RBP19.76■□□□□ 0.75
LIME1-206ENST00000487026 OR4C45A6NMZ5 311 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 E9PQ18 207 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 OR2H2O95918 312 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 OPN1MWP04001 364 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 OPN1MW2P0DN77 364 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 OPN1MW3P0DN78 364 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 ALDH3A2P51648 485 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 CCR9P51686 369 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 P2RX3P56373 397 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 BLCAPP62952 87 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 SCN1BQ07699 218 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 SPIN3Q5JUX0 258 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 LHFPL3Q86UP9 236 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 Q8N2B8 174 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 DTX3Q8N9I9 347 aa19.75■□□□□ 0.75
LIME1-206ENST00000487026 EXOSC4Q9NPD3 245 aaKnown RBP19.75■□□□□ 0.75
LIME1-206ENST00000487026 F2RL2O00254 374 aa19.74■□□□□ 0.75
LIME1-206ENST00000487026 SH2D1BO14796 132 aa19.74■□□□□ 0.75
LIME1-206ENST00000487026 DYNLT3P51808 116 aa19.74■□□□□ 0.75
LIME1-206ENST00000487026 MINOS1Q5TGZ0 78 aa19.74■□□□□ 0.75
LIME1-206ENST00000487026 PRAMEF5Q5TYX0 476 aa19.74■□□□□ 0.75
LIME1-206ENST00000487026 CBR4Q8N4T8 237 aa19.74■□□□□ 0.75
LIME1-206ENST00000487026 SPSB1Q96BD6 273 aa19.74■□□□□ 0.75
LIME1-206ENST00000487026 CLEC7AQ9BXN2 247 aa19.74■□□□□ 0.75
LIME1-206ENST00000487026 PRSS22Q9GZN4 317 aa19.74■□□□□ 0.75
LIME1-206ENST00000487026 ISG20L2Q9H9L3 353 aaKnown RBP19.74■□□□□ 0.75
LIME1-206ENST00000487026 MINOS1-NBL1R4GNA1 71 aa19.74■□□□□ 0.75
LIME1-206ENST00000487026 FBXO24O75426 580 aa19.73■□□□□ 0.75
LIME1-206ENST00000487026 ERP29P30040 261 aaKnown RBP19.73■□□□□ 0.75
LIME1-206ENST00000487026 GLIPR1P48060 266 aa19.73■□□□□ 0.75
LIME1-206ENST00000487026 AESQ08117 197 aa19.73■□□□□ 0.75
LIME1-206ENST00000487026 ALKBH1Q13686 389 aaKnown RBP19.73■□□□□ 0.75
LIME1-206ENST00000487026 NEK6Q9HC98 313 aa19.73■□□□□ 0.75
LIME1-206ENST00000487026 AMBNQ9NP70 447 aa19.73■□□□□ 0.75
LIME1-206ENST00000487026 ING3Q9NXR8 418 aa19.73■□□□□ 0.75
LIME1-206ENST00000487026 MYRFQ9Y2G1 1151 aa19.73■□□□□ 0.75
LIME1-206ENST00000487026 UBE2J1Q9Y385 318 aaPredicted RBP19.73■□□□□ 0.75
LIME1-206ENST00000487026 GMPPBQ9Y5P6 360 aa19.73■□□□□ 0.75
LIME1-206ENST00000487026 FAM172BPA6NC97 362 aa19.72■□□□□ 0.75
LIME1-206ENST00000487026 KDM4BO94953 1096 aa19.72■□□□□ 0.75
LIME1-206ENST00000487026 CD24P25063 80 aa19.72■□□□□ 0.75
LIME1-206ENST00000487026 TMEM95Q3KNT9 176 aa19.72■□□□□ 0.75
LIME1-206ENST00000487026 ARSJQ5FYB0 599 aaPredicted RBP19.72■□□□□ 0.75
LIME1-206ENST00000487026 ABHD12Q8N2K0 398 aa19.72■□□□□ 0.75
LIME1-206ENST00000487026 OR4P4Q8NGL7 312 aa19.72■□□□□ 0.75
LIME1-206ENST00000487026 ALG8Q9BVK2 526 aa19.72■□□□□ 0.75
LIME1-206ENST00000487026 ZCCHC4Q9H5U6 513 aa19.72■□□□□ 0.75
LIME1-206ENST00000487026 KIAA2026Q5HYC2 2103 aa19.72■□□□□ 0.75
LIME1-206ENST00000487026 PEX14O75381 377 aa19.71■□□□□ 0.75
LIME1-206ENST00000487026 MT-ND2P03891 347 aa19.71■□□□□ 0.75
LIME1-206ENST00000487026 GABRB1P18505 474 aa19.71■□□□□ 0.75
LIME1-206ENST00000487026 CDK2P24941 298 aa19.71■□□□□ 0.75
LIME1-206ENST00000487026 HTR1DP28221 377 aa19.71■□□□□ 0.75
LIME1-206ENST00000487026 GDNFP39905 211 aa19.71■□□□□ 0.75
LIME1-206ENST00000487026 BEAN1Q3B7T3 259 aa19.71■□□□□ 0.75
LIME1-206ENST00000487026 PLXNB1O43157 2135 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 TRGV10A0A0A0MS01 117 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 A0A0G2JK05 382 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 SNTNA6NMZ2 147 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 E9PI62 339 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 PRB2P02812 416 aaPredicted RBP19.7■□□□□ 0.74
LIME1-206ENST00000487026 ZNF44P15621 663 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 GALEQ14376 348 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 Q6P435 159 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 ZBTB49Q6ZSB9 765 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 WIPF2Q8TF74 440 aaPredicted RBP19.7■□□□□ 0.74
LIME1-206ENST00000487026 CITED2Q99967 270 aaPredicted RBP19.7■□□□□ 0.74
LIME1-206ENST00000487026 COMMD4Q9H0A8 199 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 MMP28Q9H239 520 aa19.7■□□□□ 0.74
LIME1-206ENST00000487026 FAM90A22PA8MWA6 464 aa19.69■□□□□ 0.74
LIME1-206ENST00000487026 DBTP11182 482 aaKnown RBP19.69■□□□□ 0.74
LIME1-206ENST00000487026 LMO1P25800 156 aa19.69■□□□□ 0.74
LIME1-206ENST00000487026 SAMD5Q5TGI4 173 aa19.69■□□□□ 0.74
LIME1-206ENST00000487026 ZFP1Q6P2D0 407 aa19.69■□□□□ 0.74
LIME1-206ENST00000487026 CORO2AQ92828 525 aa19.69■□□□□ 0.74
LIME1-206ENST00000487026 SLC29A1Q99808 456 aa19.69■□□□□ 0.74
LIME1-206ENST00000487026 WNT10AQ9GZT5 417 aa19.69■□□□□ 0.74
LIME1-206ENST00000487026 GAL3ST2Q9H3Q3 398 aa19.69■□□□□ 0.74
LIME1-206ENST00000487026 PCDHGB5Q9Y5G0 923 aa19.69■□□□□ 0.74
LIME1-206ENST00000487026 FUOMA2VDF0 154 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 DEGS1O15121 323 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 ZFPL1O95159 310 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 HCKP08631 526 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 TMEM225BP0DP42 221 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 VDAC2P45880 294 aaPredicted RBP19.68■□□□□ 0.74
LIME1-206ENST00000487026 EMX1Q04741 257 aaPredicted RBP19.68■□□□□ 0.74
LIME1-206ENST00000487026 IL18R1Q13478 541 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 UTF1Q5T230 341 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 OR52W1Q6IF63 320 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 HEPN1Q6WQI6 88 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 SAXO1Q8IYX7 474 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 RHOXF1Q8NHV9 184 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 MRPL48Q96GC5 212 aaKnown RBP19.68■□□□□ 0.74
LIME1-206ENST00000487026 PDCD1LG2Q9BQ51 273 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 ZNF649Q9BS31 505 aa19.68■□□□□ 0.74
LIME1-206ENST00000487026 ZNF286AQ9HBT8 521 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms