RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RAB18Q9NP72 206 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 SIRT7Q9NRC8 400 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 DCAF13Q9NV06 445 aaKnown RBP3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 HAO2Q9NYQ3 351 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 ADA2Q9NZK5 511 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 ONECUT1Q9UBC0 465 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 CD300AQ9UGN4 299 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 SAMD4AQ9UPU9 718 aaKnown RBP3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 MAB21L2Q9Y586 359 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 CAPN7Q9Y6W3 813 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 TENM3Q9P273 2699 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 A0A1B0GW55 424 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 MEIOCA2RUB1 952 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 TVP23AA6NH52 213 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 TMEM210A6NLX4 147 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 SMIM1B2RUZ4 78 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNF878C9JN71 531 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 H3BUX3 64 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNF593O00488 134 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 CDIPTO14735 213 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 DIRAS1O95057 198 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 GADD45GO95257 159 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 APOC1P02654 83 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 PRB2P02812 416 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 DUX4L2P0CJ85 424 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 DUX4L3P0CJ86 424 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 DUX4L4P0CJ87 422 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 DUX4L5P0CJ88 424 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 DUX4L6P0CJ89 424 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 DUX4L7P0CJ90 424 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 COX4I1P13073 169 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 NCK1P16333 377 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 GNB3P16520 340 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 CFL1P23528 166 aaKnown RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 BDKRB2P30411 391 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 FMO3P31513 532 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 PYCR1P32322 319 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 IFNGR2P38484 337 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 RPS27P42677 84 aaKnown RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 PRKXP51817 358 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 BLVRAP53004 296 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 CAV3P56539 151 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 GRB2P62993 217 aaKnown RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 ELF3P78545 371 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 FAM3AP98173 230 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 IL5RAQ01344 420 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 TSPAN31Q12999 210 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 TAF13Q15543 124 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 LRRC75BQ2VPJ9 315 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 STUMQ69YW2 141 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 GLYATQ6IB77 296 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 HCP5Q6MZN7 132 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 RPL13AP3Q6NVV1 102 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 DUX4L9Q6RFH8 374 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC16A9Q7RTY1 509 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 DCXRQ7Z4W1 244 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 WDR86Q86TI4 376 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 ZDHHC21Q8IVQ6 265 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 FTMTQ8N4E7 242 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 KLHDC1Q8N7A1 406 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 FAM216BQ8N7L0 139 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 CSNK2A3Q8NEV1 391 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 SDR9C7Q8NEX9 313 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 PROKR2Q8NFJ6 384 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 OR52H1Q8NGJ2 320 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 OR5D13Q8NGL4 314 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 OR4C13Q8NGP0 309 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 OR2T6Q8NHC8 308 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 ANGPTL6Q8NI99 470 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 MRAPQ8TCY5 172 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 GNPDA2Q8TDQ7 276 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNRF4Q8WWF5 429 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 SGK3Q96BR1 496 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 SLAMF6Q96DU3 332 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 RAB3IPQ96QF0 476 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 SSX3Q99909 188 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 MICU1Q9BPX6 476 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 KCTD14Q9BQ13 255 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 COPS4Q9BT78 406 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 NSRP1Q9H0G5 558 aaKnown RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 FN3KQ9H479 309 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 RGCCQ9H4X1 137 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 PPP1R3EQ9H7J1 279 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 GORASP2Q9H8Y8 452 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 VIPAS39Q9H9C1 493 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 ABCB9Q9NP78 766 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 CENPMQ9NSP4 180 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 FGFR1OP2Q9NVK5 253 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 NECAP2Q9NVZ3 263 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 IL20Q9NYY1 176 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 KIAA1456Q9P272 454 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 ABCD2Q9UBJ2 740 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 DUX4Q9UBX2 424 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC25A10Q9UBX3 287 aaPredicted RBP3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 HSPB7Q9UBY9 170 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 FOXJ3Q9UPW0 622 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 SIGLEC9Q9Y336 463 aa3.17□□□□□ -1.9
SNRNP40-205ENST00000486941 N6AMT1Q9Y5N5 214 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms