RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 C13orf42A0A1B0GVH6 325 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 RPS10-NUDT3A0A1W2PQS6 291 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 IGKV3-15P01624 115 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 CRHP06850 196 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 RAC2P15153 192 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 CALCRP30988 508 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 PTGER4P35408 488 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 FOXF2Q12947 444 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 TSC22D1Q15714 1073 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 SRSF7Q16629 238 aaKnown RBP eCLIP17.4■□□□□ 0.38
HPS3-206ENST00000486530 C17orf78Q8N4C9 275 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 THAP6Q8TBB0 222 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 MICU1Q9BPX6 476 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 OR51I2Q9H344 312 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 SPACA1Q9HBV2 294 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 RDH8Q9NYR8 311 aa17.4■□□□□ 0.38
HPS3-206ENST00000486530 MBD3L4A6NDZ8 208 aaPredicted RBP17.39■□□□□ 0.38
HPS3-206ENST00000486530 MBD3L3A6NE82 208 aaPredicted RBP17.39■□□□□ 0.38
HPS3-206ENST00000486530 MBD3L5A6NJ08 208 aaPredicted RBP17.39■□□□□ 0.38
HPS3-206ENST00000486530 J3QT63 122 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 OR2F2O95006 317 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 IFNA2P01563 188 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 SELEP16581 610 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 PRKACAP17612 351 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 GLP1RP43220 463 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 OR2F1Q13607 317 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 IL13RA2Q14627 380 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 Q6ZPA2 131 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 SGPP2Q8IWX5 399 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 WDR31Q8NA23 367 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 MBD3L2Q8NHZ7 208 aaPredicted RBP17.39■□□□□ 0.38
HPS3-206ENST00000486530 HS3ST6Q96QI5 342 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 LIME1Q9H400 295 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 PROCRQ9UNN8 238 aa17.39■□□□□ 0.38
HPS3-206ENST00000486530 CRYM-AS1A6NIL9 109 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 B3GALNT1O75752 331 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 TNFSF13O75888 250 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 ZNF728P0DKX0 622 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 UCP2P55851 309 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 KCNRGQ8N5I3 272 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 SLC25A40Q8TBP6 338 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 CCDC120Q96HB5 630 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 GSX2Q9BZM3 304 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 C1orf123Q9NWV4 160 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 IL36RNQ9UBH0 155 aa17.39■□□□□ 0.37
HPS3-206ENST00000486530 GTF3C1Q12789 2109 aa17.38■□□□□ 0.37
HPS3-206ENST00000486530 IQCF6A8MYZ5 107 aa17.38■□□□□ 0.37
HPS3-206ENST00000486530 NAPSAO96009 420 aa17.38■□□□□ 0.37
HPS3-206ENST00000486530 PSMB6P28072 239 aa17.38■□□□□ 0.37
HPS3-206ENST00000486530 RBMXP38159 391 aaKnown RBP17.38■□□□□ 0.37
HPS3-206ENST00000486530 AP2S1P53680 142 aaPredicted RBP17.38■□□□□ 0.37
HPS3-206ENST00000486530 SLC51BQ86UW2 128 aa17.38■□□□□ 0.37
HPS3-206ENST00000486530 OR1J1Q8NGS3 322 aa17.38■□□□□ 0.37
HPS3-206ENST00000486530 WDR13Q9H1Z4 485 aa17.38■□□□□ 0.37
HPS3-206ENST00000486530 OBP2BQ9NPH6 170 aa17.38■□□□□ 0.37
HPS3-206ENST00000486530 INTS1Q8N201 2190 aaKnown RBP17.38■□□□□ 0.37
HPS3-206ENST00000486530 LRP5LA4QPB2 252 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 WDR1O75083 606 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 ADAP1O75689 374 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 FCGR2CP31995 323 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 UNQ6126/PRO20091Q6UXV3 157 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 ACOT7LQ6ZUV0 252 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 FAM58AQ8N1B3 248 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 TOMM40LQ969M1 308 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 MOB3AQ96BX8 217 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 STARD4Q96DR4 205 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 PIK3IP1Q96FE7 263 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 PRR13Q9NZ81 148 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 AUP1Q9Y679 476 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 TEX13DA0A0J9YY54 714 aaPredicted RBP17.37■□□□□ 0.37
HPS3-206ENST00000486530 CGAP01215 116 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 CRYABP02511 175 aaKnown RBP17.37■□□□□ 0.37
HPS3-206ENST00000486530 UCP3P55916 312 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 ERVS71-1P61550 626 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 P2RY6Q15077 328 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 FAM76BQ5HYJ3 339 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 CXorf67Q86X51 503 aaPredicted RBP17.37■□□□□ 0.37
HPS3-206ENST00000486530 GTF3AQ92664 365 aaKnown RBP17.37■□□□□ 0.37
HPS3-206ENST00000486530 CITED4Q96RK1 184 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 ADAT1Q9BUB4 502 aaKnown RBP17.37■□□□□ 0.37
HPS3-206ENST00000486530 METTL8Q9H825 291 aaKnown RBP17.37■□□□□ 0.37
HPS3-206ENST00000486530 Q9N2K0 584 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 MBD2Q9UBB5 411 aa17.37■□□□□ 0.37
HPS3-206ENST00000486530 GLAP06280 429 aa17.36■□□□□ 0.37
HPS3-206ENST00000486530 PIGPP57054 158 aa17.36■□□□□ 0.37
HPS3-206ENST00000486530 EIF2S3LQ2VIR3 472 aaKnown RBP17.36■□□□□ 0.37
HPS3-206ENST00000486530 ABCA11PQ4W5N1 156 aa17.36■□□□□ 0.37
HPS3-206ENST00000486530 SEM1Q6ZVN7 128 aa17.36■□□□□ 0.37
HPS3-206ENST00000486530 NEK7Q8TDX7 302 aa17.36■□□□□ 0.37
HPS3-206ENST00000486530 SCARB1Q8WTV0 552 aa17.36■□□□□ 0.37
HPS3-206ENST00000486530 ZNF488Q96MN9 340 aa17.36■□□□□ 0.37
HPS3-206ENST00000486530 RIMS4Q9H426 269 aaPredicted RBP17.36■□□□□ 0.37
HPS3-206ENST00000486530 IFT22Q9H7X7 185 aa17.36■□□□□ 0.37
HPS3-206ENST00000486530 POLDIP2Q9Y2S7 368 aa17.36■□□□□ 0.37
HPS3-206ENST00000486530 LAMA5O15230 3695 aa17.36■□□□□ 0.37
HPS3-206ENST00000486530 KANTRA0A1W2PQU2 76 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 RNF222A6NCQ9 220 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 LEUTXA8MZ59 168 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 TUBG1P23258 451 aa17.35■□□□□ 0.37
HPS3-206ENST00000486530 ID4P47928 161 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms