RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 SIKE1Q9BRV8 207 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 PRRG3Q9BZD7 231 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 TSGA10Q9BZW7 698 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 NXF2Q9GZY0 626 aaKnown RBP1.28□□□□□ -2.2
GCFC2-209ENST00000486016 RAB1BQ9H0U4 201 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 POMKQ9H5K3 350 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 DNAJC27Q9NZQ0 273 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 CLEC2DQ9UHP7 191 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 ZNF780BQ9Y6R6 833 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 ADAMTSL3P82987 1691 aa1.28□□□□□ -2.2
GCFC2-209ENST00000486016 NRCAMQ92823 1304 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 A0A1B0GXF2 115 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 C15orf65H3BRN8 121 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 hCG_2039718K7EN88 272 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 PSMD11O00231 422 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 SPOPO43791 374 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 IVLP07476 585 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 GIMD1P0DJR0 217 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 PTHLHP12272 177 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 CCL23P55773 120 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 RAB38P57729 211 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 DSTNP60981 165 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 TNNC1P63316 161 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 BNIP2Q12982 314 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 IHHQ14623 411 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 PDZD11Q5EBL8 140 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF470Q6ECI4 717 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 WDR59Q6PJI9 974 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF773Q6PK81 442 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 TPGS1Q6ZTW0 290 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 GALNT10Q86SR1 603 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 RBM45Q8IUH3 476 aaKnown RBP1.27□□□□□ -2.21
GCFC2-209ENST00000486016 AMN1Q8IY45 258 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 ST13P4Q8IZP2 240 aaPredicted RBP1.27□□□□□ -2.21
GCFC2-209ENST00000486016 OR6K3Q8NGY3 331 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 CCL17Q92583 94 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 OTUB2Q96DC9 234 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 MSANTD3Q96H12 275 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 CPB2Q96IY4 423 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 DUSP21Q9H596 190 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 HAUS4Q9H6D7 363 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 PLEKHA1Q9HB21 404 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 ASF1BQ9NVP2 202 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF230Q9UIE0 474 aaPredicted RBP1.27□□□□□ -2.21
GCFC2-209ENST00000486016 SLC22A14Q9Y267 594 aa1.27□□□□□ -2.21
GCFC2-209ENST00000486016 NOS1P29475 1434 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 ZBED9Q6R2W3 1325 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 IGHV3-21A0A0B4J1V1 117 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 IGHV3-43A0A0B4J1X8 118 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 A0A1B0GW15 77 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 MYBPHLA2RUH7 354 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 CD300LBA8K4G0 201 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 MYO1DO94832 1006 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 TRGV3P03979 118 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 IGKV5-2P06315 115 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 SOD3P08294 240 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 CECR9P0C854 216 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 CCL2P13500 99 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 PRPS1L1P21108 318 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 PRTN3P24158 256 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 IL12BP29460 328 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 LGALS7P47929 136 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 GCLMP48507 274 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 KRTAP25-1Q3LHN0 102 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 PYDC2Q56P42 97 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 TTMPQ5BVD1 217 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 AADACL4Q5VUY2 407 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 AMMECR1LQ6DCA0 310 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 GLYATQ6IB77 296 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 ERICH5Q6P6B1 374 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 PAGE2Q7Z2X7 111 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 ZFP82Q8N141 532 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 SPICQ8N5J4 248 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 OR8G5Q8NG78 346 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 OR2M3Q8NG83 312 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 ACTL9Q8TC94 416 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 C2orf15Q8WU43 125 aaKnown RBP1.26□□□□□ -2.21
GCFC2-209ENST00000486016 NELFBQ8WX92 580 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF75AQ96N20 296 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 BIRC8Q96P09 236 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 ANAPC13Q9BS18 74 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF436Q9C0F3 470 aaPredicted RBP1.26□□□□□ -2.21
GCFC2-209ENST00000486016 TXNIPQ9H3M7 391 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 DSN1Q9H410 356 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 XKR8Q9H6D3 395 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 DIABLOQ9NR28 239 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 CYB5R1Q9UHQ9 305 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 NXT1Q9UKK6 140 aaKnown RBP1.26□□□□□ -2.21
GCFC2-209ENST00000486016 STK38LQ9Y2H1 464 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 TRAPPC1Q9Y5R8 145 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 ICOSQ9Y6W8 199 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 PLXNB3Q9ULL4 1909 aa1.26□□□□□ -2.21
GCFC2-209ENST00000486016 SSH2Q76I76 1423 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 SYNRGQ9UMZ2 1314 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 LOC100506127A0A0U1RQW1 187 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 ZNF729A6NN14 1252 aaPredicted RBP1.25□□□□□ -2.21
GCFC2-209ENST00000486016 A8MWP4 228 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 F5H5P2 479 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 H3BP45 60 aa1.25□□□□□ -2.21
GCFC2-209ENST00000486016 K7ERS5 55 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms