RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 RAB26Q9ULW5 256 aa15.71■□□□□ 0.11
SNX17-206ENST00000484886 FAM96BQ9Y3D0 163 aa15.71■□□□□ 0.11
SNX17-206ENST00000484886 MEX3AA1L020 520 aaKnown RBP15.7■□□□□ 0.1
SNX17-206ENST00000484886 OR2H2O95918 312 aa15.7■□□□□ 0.1
SNX17-206ENST00000484886 ZNF44P15621 663 aa15.7■□□□□ 0.1
SNX17-206ENST00000484886 ZNF93P35789 620 aaPredicted RBP15.7■□□□□ 0.1
SNX17-206ENST00000484886 OR3A4PP47883 348 aa15.7■□□□□ 0.1
SNX17-206ENST00000484886 DOC2BQ14184 412 aa15.7■□□□□ 0.1
SNX17-206ENST00000484886 SPHARQ15513 63 aa15.7■□□□□ 0.1
SNX17-206ENST00000484886 OR10K1Q8NGX5 313 aa15.7■□□□□ 0.1
SNX17-206ENST00000484886 FAM216AQ8WUB2 273 aa15.7■□□□□ 0.1
SNX17-206ENST00000484886 TNFRSF19Q9NS68 423 aa15.7■□□□□ 0.1
SNX17-206ENST00000484886 BLOC1S6Q9UL45 172 aa15.7■□□□□ 0.1
SNX17-206ENST00000484886 ING4Q9UNL4 249 aa15.7■□□□□ 0.1
SNX17-206ENST00000484886 TRAV8-7A0A075B6U6 113 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 RNASEK-C17orf49H0YIS7 233 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 ALDOBP05062 364 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 HSMCR30P0CW71 290 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 CCL3L1P16619 93 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 PRTN3P24158 256 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 CRHBPP24387 322 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 MAPK3P27361 379 aaPredicted RBP15.69■□□□□ 0.1
SNX17-206ENST00000484886 TGFBR2P37173 567 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 MTNR1BP49286 362 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 BMXP51813 675 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 ZNF273Q14593 569 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 METAP1DQ6UB28 335 aaPredicted RBP15.69■□□□□ 0.1
SNX17-206ENST00000484886 C17orf107Q6ZR85 190 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 PXT1Q8NFP0 134 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 THRSPQ92748 146 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 SLC25A28Q96A46 364 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 ZNF184Q99676 751 aaPredicted RBP15.69■□□□□ 0.1
SNX17-206ENST00000484886 TMED9Q9BVK6 235 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 Q9H521 79 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 DUSP21Q9H596 190 aa15.69■□□□□ 0.1
SNX17-206ENST00000484886 ZMAT3Q9HA38 289 aaKnown RBP15.69■□□□□ 0.1
SNX17-206ENST00000484886 SEBOXQ9HB31 216 aaPredicted RBP15.69■□□□□ 0.1
SNX17-206ENST00000484886 RRP15Q9Y3B9 282 aaKnown RBP15.69■□□□□ 0.1
SNX17-206ENST00000484886 TRBV5-7A0A0A0MS05 114 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 A0A0U1RQK1 487 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 DEGS1O15121 323 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 NPFFO15130 113 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 HOXA3O43365 443 aaPredicted RBP15.68■□□□□ 0.1
SNX17-206ENST00000484886 PSPNO60542 156 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 CDRT1O95170 752 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 HTR3BO95264 441 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 MAS1P04201 325 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 CD1AP06126 327 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 IGFBP3P17936 291 aaPredicted RBP15.68■□□□□ 0.1
SNX17-206ENST00000484886 FSTP19883 344 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 PTGFRP43088 359 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 ACSM1Q08AH1 577 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 TUSC1Q2TAM9 212 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 RBM48Q5RL73 367 aaKnown RBP15.68■□□□□ 0.1
SNX17-206ENST00000484886 PNKDQ8N490 385 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 JAGN1Q8N5M9 183 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 TPRX1Q8N7U7 411 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 OR4S1Q8NGB4 309 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 UFD1Q92890 307 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 GCDHQ92947 438 aaPredicted RBP15.68■□□□□ 0.1
SNX17-206ENST00000484886 DERL3Q96Q80 235 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 METTL9Q9H1A3 318 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 NOX4Q9NPH5 578 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 ING3Q9NXR8 418 aa15.68■□□□□ 0.1
SNX17-206ENST00000484886 LSM2Q9Y333 95 aaKnown RBP15.68■□□□□ 0.1
SNX17-206ENST00000484886 hADV38S2A0JD32 116 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 MAGEA13PA6NCF6 341 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 MGST3O14880 152 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 PAHP00439 452 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 CSTBP04080 98 aaKnown RBP15.67■□□□□ 0.1
SNX17-206ENST00000484886 OR3A1P47881 315 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 UBE2E1P51965 193 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 IRF3Q14653 427 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 SLC9A3R2Q15599 337 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 ZNF782Q6ZMW2 699 aaPredicted RBP15.67■□□□□ 0.1
SNX17-206ENST00000484886 TRAPPC6BQ86SZ2 158 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 MS4A15Q8N5U1 240 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 C1orf147Q96MC9 270 aaPredicted RBP15.67■□□□□ 0.1
SNX17-206ENST00000484886 PPA2Q9H2U2 334 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 HEXA-AS1Q9H8Q6 139 aa15.67■□□□□ 0.1
SNX17-206ENST00000484886 UNKLQ9H9P5 680 aaKnown RBP15.67■□□□□ 0.1
SNX17-206ENST00000484886 SF3B6Q9Y3B4 125 aaKnown RBP15.67■□□□□ 0.1
SNX17-206ENST00000484886 MEIOCA2RUB1 952 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 GPX5O75715 221 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 ZNF728P0DKX0 622 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 SERPINA2P20848 420 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 COX7A1P24310 79 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 ERVFRD-1P60508 538 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 MEF2CQ06413 473 aaPredicted RBP15.66■□□□□ 0.1
SNX17-206ENST00000484886 LIPKQ5VXJ0 399 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 ELP2Q6IA86 826 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 PRSS48Q7RTY5 328 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 CHST4Q8NCG5 386 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 TNFRSF14Q92956 283 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 ZNF714Q96N38 554 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 FOXJ3Q9UPW0 622 aa15.66■□□□□ 0.1
SNX17-206ENST00000484886 FUOMA2VDF0 154 aa15.65■□□□□ 0.1
SNX17-206ENST00000484886 HSPB6O14558 160 aa15.65■□□□□ 0.1
SNX17-206ENST00000484886 RNASE1P07998 156 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms