RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 ZNF44P15621 663 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 GUCA2AQ02747 115 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 SCN1BQ07699 218 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 OLFML2AQ68BL7 652 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 Q6P435 159 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 TGIF2LYQ8IUE0 185 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 LYSMD2Q8IV50 215 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 GPX8Q8TED1 209 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 TMEM106BQ9NUM4 274 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 NLKQ9UBE8 527 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 DEGS1O15121 323 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 LANCL1O43813 399 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 OR2H2O95918 312 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 HAND1O96004 215 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 INPP1P49441 399 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 C19orf18Q8NEA5 215 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 NUDCD2Q8WVJ2 157 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 CCL17Q92583 94 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 SULT4A1Q9BR01 284 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 RBMX2Q9Y388 322 aaKnown RBP17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 CACNG2Q9Y698 323 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 DSCAMO60469 2012 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 DCHS2Q6V1P9 2916 aa17.18■□□□□ 0.34
VCPKMT-203ENST00000484763 CA11O75493 328 aa17.18■□□□□ 0.34
VCPKMT-203ENST00000484763 CD80P33681 288 aa17.18■□□□□ 0.34
VCPKMT-203ENST00000484763 ARFRP1Q13795 201 aa17.18■□□□□ 0.34
VCPKMT-203ENST00000484763 NEU4Q8WWR8 484 aaPredicted RBP17.18■□□□□ 0.34
VCPKMT-203ENST00000484763 CYYR1Q96J86 154 aa17.18■□□□□ 0.34
VCPKMT-203ENST00000484763 FAAP24Q9BTP7 215 aa17.18■□□□□ 0.34
VCPKMT-203ENST00000484763 WIPI2Q9Y4P8 454 aa17.18■□□□□ 0.34
VCPKMT-203ENST00000484763 USP9YO00507 2555 aaPredicted RBP17.18■□□□□ 0.34
VCPKMT-203ENST00000484763 HELZ2Q9BYK8 2649 aaKnown RBP17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 GDNFP39905 211 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 TRAPPC6BQ86SZ2 158 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 SUMF2Q8NBJ7 301 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 DCAF16Q9NXF7 216 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 KLK11Q9UBX7 282 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 MTFP1Q9UDX5 166 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 TRAV24A0A0B4J272 114 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 MEIS3P1A6NDR6 274 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 RFPL4AA6NLU0 287 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 OR2AT4A6NND4 320 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 RFPL4AL1F8VTS6 287 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 TMEM178BH3BS89 294 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 SIRPB1O00241 398 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 ORC5O43913 435 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 RBBP9O75884 186 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 GLAP06280 429 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 SSBP1Q04837 148 aaKnown RBP17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 MICBQ29980 383 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 HFEQ30201 348 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 FAM201AQ5SY85 155 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 SFRP4Q6FHJ7 346 aaPredicted RBP17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 BRICD5Q6PL45 260 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 DPCDQ9BVM2 203 aaPredicted RBP17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 AK3Q9UIJ7 227 aa17.17■□□□□ 0.34
VCPKMT-203ENST00000484763 IGHV3OR15-7A0A075B7D8 119 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 UBE2QL1A1L167 161 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 ISPDA4D126 451 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 OOEPA6NGQ2 149 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 MCRIP1C9JLW8 97 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 SLC33A1O00400 549 aaPredicted RBP17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 SSX5O60225 188 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 PSG2P11465 335 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 MUC1P15941 1255 aaPredicted RBP17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 CDKN1AP38936 164 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 CEBPDP49716 269 aaPredicted RBP17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 ACTBP60709 375 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 ACTG1P63261 375 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 MRPS15P82914 257 aaKnown RBP17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 RBM39Q14498 530 aaKnown RBP17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 TEX36Q5VZQ5 186 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 ZNF57Q68EA5 555 aaPredicted RBP17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 TOMM5Q8N4H5 51 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 NEK7Q8TDX7 302 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 RDH5Q92781 318 aa17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 SEBOXQ9HB31 216 aaPredicted RBP17.16■□□□□ 0.34
VCPKMT-203ENST00000484763 HSPB6O14558 160 aa17.15■□□□□ 0.34
VCPKMT-203ENST00000484763 LMO1P25800 156 aa17.15■□□□□ 0.34
VCPKMT-203ENST00000484763 PAN3Q58A45 887 aaKnown RBP17.15■□□□□ 0.34
VCPKMT-203ENST00000484763 OR5T2Q8NGG2 359 aa17.15■□□□□ 0.34
VCPKMT-203ENST00000484763 CMSS1Q9BQ75 279 aaKnown RBP17.15■□□□□ 0.34
VCPKMT-203ENST00000484763 IGKV1D-17A0A075B6S4 117 aa17.14■□□□□ 0.34
VCPKMT-203ENST00000484763 CBX5P45973 191 aa17.14■□□□□ 0.34
VCPKMT-203ENST00000484763 DEFA1P59665 94 aa17.14■□□□□ 0.34
VCPKMT-203ENST00000484763 DEFA3P59666 94 aa17.14■□□□□ 0.34
VCPKMT-203ENST00000484763 MRPS11P82912 194 aaKnown RBP17.14■□□□□ 0.34
VCPKMT-203ENST00000484763 DYRK2Q92630 601 aa17.14■□□□□ 0.34
VCPKMT-203ENST00000484763 C14orf79Q96F83 325 aa17.14■□□□□ 0.34
VCPKMT-203ENST00000484763 IFT46Q9NQC8 304 aa17.14■□□□□ 0.34
VCPKMT-203ENST00000484763 DLL4Q9NR61 685 aa17.14■□□□□ 0.34
VCPKMT-203ENST00000484763 PPIAL4EA0A075B759 164 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 PPIAL4DF5H284 164 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 LGALS8O00214 317 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 ZNF205O95201 554 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 ECDO95905 644 aaPredicted RBP17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 GSTT2BP0CG30 244 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 PPIAL4FP0DN26 164 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 COL8A1P27658 744 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 PRDX2P32119 198 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms