RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 RNASE11Q8TAA1 199 aaKnown RBP0.78□□□□□ -2.28
SCAF11-207ENST00000484275 NDNFQ8TB73 568 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 UBA3Q8TBC4 463 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 FAM131CQ96AQ9 280 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 METTL26Q96S19 204 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 HIGD2AQ9BW72 106 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 PORCNQ9H237 461 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 SYT4Q9H2B2 425 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 PRORYQ9H606 182 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 C12orf4Q9NQ89 552 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 TAC3Q9UHF0 121 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 ORC6Q9Y5N6 252 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 TRAPPC1Q9Y5R8 145 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 ZNF780BQ9Y6R6 833 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 MYO15BQ96JP2 1530 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 LCTP09848 1927 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 ZNF638Q14966 1978 aaKnown RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 LOC389332A0A1B0GUA5 103 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 SLC5A10A0PJK1 596 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 OR2AT4A6NND4 320 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 K7EPK0 472 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 ZNF593O00488 134 aaPredicted RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 PRMT5O14744 637 aaPredicted RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 RGS5O15539 181 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 RNF113AO15541 343 aaKnown RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 SLC37A4O43826 429 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 ZMPSTE24O75844 475 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 OR2A4O95047 310 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 CXorf1O96002 111 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 CDK1P06493 297 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 LIPCP11150 499 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 GZMAP12544 262 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 MLNP12872 115 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 TAC1P20366 129 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 BGNP21810 368 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 CPN2P22792 545 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 IMPA1P29218 277 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 SLC6A1P30531 599 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 GPR4P46093 362 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 SLC18A1P54219 525 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 CCL23P55773 120 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 DSTNP60981 165 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 BNIP2Q12982 314 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 DYNC1I2Q13409 638 aaKnown RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 ENDOGQ14249 297 aaKnown RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 PMVKQ15126 192 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 VAMP3Q15836 100 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 SSX1Q16384 188 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 TAL2Q16559 108 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 HNRNPA1L2Q32P51 320 aaKnown RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 TTMPQ5BVD1 217 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 C16orf87Q6PH81 154 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 CLEC19AQ6UXS0 136 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 Q6ZQT7 251 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 CPNE9Q8IYJ1 553 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 ASCC1Q8N9N2 400 aaKnown RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 ZNF555Q8NEP9 628 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 OR51Q1Q8NH59 317 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 PPP1R36Q96LQ0 422 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 QKIQ96PU8 341 aaKnown RBP eCLIP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 OR2A7Q96R45 310 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 VAT1Q99536 393 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 C20orf144Q9BQM9 153 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 CHID1Q9BWS9 393 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 MAP1LC3CQ9BXW4 147 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 TM6SF2Q9BZW4 377 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 SRRQ9GZT4 340 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 CHRNA10Q9GZZ6 450 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 SLC38A1Q9H2H9 487 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 DIABLOQ9NR28 239 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 SDHAF3Q9NRP4 125 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 SDHAF2Q9NX18 166 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 ANXA10Q9UJ72 324 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 KLF13Q9Y2Y9 288 aaPredicted RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 INSIG2Q9Y5U4 225 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 BZW2Q9Y6E2 419 aaKnown RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 V9GYY9 64 aa0.77□□□□□ -2.29
SCAF11-207ENST00000484275 DNMT1P26358 1616 aaKnown RBP0.77□□□□□ -2.29
SCAF11-207ENST00000484275 ADAMTS7Q9UKP4 1686 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 ADGRB3O60242 1522 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 NRCAMQ92823 1304 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 TRAV8-7A0A075B6U6 113 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 A0A0B4J2C4 111 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 CD300LBA8K4G0 201 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 LEUTXA8MZ59 168 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 K7ERS5 55 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 RFXANKO14593 260 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 PSCAO43653 123 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 COX7A2P2O60397 106 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 VAPBO95292 243 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 CD8AP01732 235 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 HLA-AP01891 365 aaKnown RBP0.76□□□□□ -2.29
SCAF11-207ENST00000484275 RLN2P04090 185 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 CCDC172P0C7W6 258 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 PTNP21246 168 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 DNASE1L1P49184 302 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 XKP51811 444 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 GPR176Q14439 515 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 ZNF404Q494X3 552 aa0.76□□□□□ -2.29
SCAF11-207ENST00000484275 UBE2NLQ5JXB2 153 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms