RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TK1P04183 234 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 HTR1AP08908 422 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 CCDC159P0C7I6 412 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 PEX2P28328 305 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 SAA4P35542 130 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 POLR2IP36954 125 aaKnown RBP5.03□□□□□ -1.6
PTCD3-215ENST00000484203 ARHGDIBP52566 201 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 ISL1P61371 349 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 RAB40BQ12829 278 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 MED21Q13503 144 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 GALEQ14376 348 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 KLHL22Q53GT1 634 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 RUSC1-AS1Q66K80 236 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 SLC25A26Q70HW3 274 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 BCDIN3DQ7Z5W3 292 aaKnown RBP5.03□□□□□ -1.6
PTCD3-215ENST00000484203 SAXO1Q8IYX7 474 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 OR8H2Q8N162 312 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 CBR4Q8N4T8 237 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 Q8N7P7 452 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 ASCC1Q8N9N2 400 aaKnown RBP5.03□□□□□ -1.6
PTCD3-215ENST00000484203 CHST4Q8NCG5 386 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 OR2G2Q8NGZ5 317 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 STMN2Q93045 179 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 CREB3L1Q96BA8 519 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 SEH1LQ96EE3 360 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 RNFT2Q96EX2 444 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 SNX22Q96L94 193 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 MBOAT4Q96T53 435 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 TBX5Q99593 518 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 NPFFR1Q9GZQ6 430 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 FGF23Q9GZV9 251 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-215ENST00000484203 COMMD4Q9H0A8 199 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 RANBP3Q9H6Z4 567 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-215ENST00000484203 PPP1R3EQ9H7J1 279 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 SIRT7Q9NRC8 400 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 GPR173Q9NS66 373 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 TBL2Q9Y4P3 447 aaKnown RBP5.03□□□□□ -1.6
PTCD3-215ENST00000484203 GMPPBQ9Y5P6 360 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 NOTCH1P46531 2555 aa5.03□□□□□ -1.6
PTCD3-215ENST00000484203 MDFIC2A0A1B0GVS7 189 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 A0A1B0GW55 424 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 UBE2QL1A1L167 161 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 C17orf98A8MV24 154 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 M0R129 80 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 SH2D1BO14796 132 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 MGST3O14880 152 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 RRP9O43818 475 aaKnown RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ANGPTL7O43827 346 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ENTPD6O75354 484 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 FCN3O75636 299 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 CLPXO76031 633 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 INMTO95050 263 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 IGHV4-59P01825 116 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ALDOBP05062 364 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 CD2P06729 351 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 DUX4L2P0CJ85 424 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 DUX4L3P0CJ86 424 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 DUX4L4P0CJ87 422 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 DUX4L5P0CJ88 424 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 DUX4L6P0CJ89 424 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 DUX4L7P0CJ90 424 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF728P0DKX0 622 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 DBTP11182 482 aaKnown RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ATF1P18846 271 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 MDKP21741 143 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ERP29P30040 261 aaKnown RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 GABRA5P31644 462 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 GBX2P52951 348 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 OR12D2P58182 307 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 HOXA4Q00056 320 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 IL18R1Q13478 541 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 KPNB1Q14974 876 aaKnown RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF146Q15072 292 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 UBE2V2Q15819 145 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 LRRC75BQ2VPJ9 315 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 CCDC58Q4VC31 144 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 TOR2AQ5JU69 321 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 MINOS1Q5TGZ0 78 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 LPCAT4Q643R3 524 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 OR52W1Q6IF63 320 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 DUX4L9Q6RFH8 374 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 TMPRSS11AQ6ZMR5 421 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 SERPINA12Q8IW75 414 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 FAM58AQ8N1B3 248 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 CD177Q8N6Q3 437 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF676Q8N7Q3 588 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ZNF555Q8NEP9 628 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 OR4C13Q8NGP0 309 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 RHOXF1Q8NHV9 184 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 EMG1Q92979 244 aaKnown RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 MALSU1Q96EH3 234 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 CITED1Q99966 193 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 TTTY10Q9BZA0 68 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 GAL3ST2Q9H3Q3 398 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 PCDHB16Q9NRJ7 776 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ABCB10Q9NRK6 738 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 TNFRSF19Q9NS68 423 aa5.02□□□□□ -1.61
PTCD3-215ENST00000484203 MRPS18AQ9NVS2 196 aaKnown RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-215ENST00000484203 DUX4Q9UBX2 424 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms