RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 CHST4Q8NCG5 386 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 Q8NFD4 153 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 PHYHIPQ92561 330 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 EMG1Q92979 244 aaKnown RBP8.21□□□□□ -1.1
CPSF4-213ENST00000484112 SLAMF9Q96A28 289 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 SEH1LQ96EE3 360 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 CNBD2Q96M20 576 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 WDFY2Q96P53 400 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 HMG20AQ9NP66 347 aa8.21□□□□□ -1.1
CPSF4-213ENST00000484112 PAK1IP1Q9NWT1 392 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-213ENST00000484112 TRBV5-7A0A0A0MS05 114 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 hCG_1809904A0A1W2PP81 198 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 A0A1W2PPE2 198 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 A0A1W2PR64 198 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 A0A1W2PRV1 198 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 MEGF11A6BM72 1044 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 SH2D1BO14796 132 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 GPR137BO60478 399 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 FCN3O75636 299 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 TK1P04183 234 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 MMP9P14780 707 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 NDUFB7P17568 137 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 LMO1P25800 156 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 BDKRB2P30411 391 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 ZNF93P35789 620 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-213ENST00000484112 RANBP1P43487 201 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 SOX2P48431 317 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 GUCA2AQ02747 115 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 MLLT11Q13015 90 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-213ENST00000484112 TPBGQ13641 420 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 GPR176Q14439 515 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 MED22Q15528 200 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 TBCEQ15813 527 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-213ENST00000484112 NCR3LG1Q68D85 454 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 TMEM86BQ8N661 226 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 CD177Q8N6Q3 437 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 ZNRF1Q8ND25 227 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 TMEM185AQ8NFB2 350 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 LINC01006Q8NI28 216 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 SSMEM1Q8WWF3 244 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 UFD1Q92890 307 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 SNX22Q96L94 193 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 ZNF488Q96MN9 340 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 SIRPDQ9H106 197 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 TAS2R4Q9NYW5 299 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 IL36GQ9NZH8 169 aa8.2□□□□□ -1.1
CPSF4-213ENST00000484112 CENPVL3A0A0U1RRI6 287 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 A0A1B0GW55 424 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 FUOMA2VDF0 154 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 ZNF737O75373 536 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 INMTO95050 263 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 HAND1O96004 215 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 IGHV4-59P01825 116 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 RBP4P02753 201 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DUX4L2P0CJ85 424 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DUX4L3P0CJ86 424 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DUX4L4P0CJ87 422 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DUX4L5P0CJ88 424 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DUX4L6P0CJ89 424 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DUX4L7P0CJ90 424 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 TMEM225BP0DP42 221 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 BCL3P20749 454 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 EEF1B2P24534 225 aaKnown RBP8.19□□□□□ -1.1
CPSF4-213ENST00000484112 ERP29P30040 261 aaKnown RBP8.19□□□□□ -1.1
CPSF4-213ENST00000484112 TGFBR2P37173 567 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 PTGFRP43088 359 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 CAPZA1P52907 286 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 RPL31P62899 125 aaKnown RBP8.19□□□□□ -1.1
CPSF4-213ENST00000484112 COL10A1Q03692 680 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 MEF2CQ06413 473 aaPredicted RBP8.19□□□□□ -1.1
CPSF4-213ENST00000484112 IL13RA2Q14627 380 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 NHLRC3Q5JS37 347 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DDI2Q5TDH0 399 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 CRIP3Q6Q6R5 217 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DUX4L9Q6RFH8 374 aaPredicted RBP8.19□□□□□ -1.1
CPSF4-213ENST00000484112 ZNF367Q7RTV3 350 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 LINC00596Q86U02 117 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 PDZD9Q8IXQ8 264 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 OR8H2Q8N162 312 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 SVOPQ8N4V2 548 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 OR52N4Q8NGI2 321 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 OR51T1Q8NGJ9 327 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 H1FXQ92522 213 aaKnown RBP8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DYRK2Q92630 601 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 LHX4Q969G2 390 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 FOXRED1Q96CU9 486 aaPredicted RBP8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DERL3Q96Q80 235 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 OR14A2Q96R54 314 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 TBX15Q96SF7 602 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 GPER1Q99527 375 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 S100A13Q99584 98 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 UQCC2Q9BRT2 126 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 CCDC90BQ9GZT6 254 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 METTL8Q9H825 291 aaKnown RBP8.19□□□□□ -1.1
CPSF4-213ENST00000484112 EXOSC4Q9NPD3 245 aaKnown RBP8.19□□□□□ -1.1
CPSF4-213ENST00000484112 RBFOX1Q9NWB1 397 aaKnown RBP8.19□□□□□ -1.1
CPSF4-213ENST00000484112 GHRLQ9UBU3 117 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 DUX4Q9UBX2 424 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 OR14J1Q9UGF5 321 aa8.19□□□□□ -1.1
CPSF4-213ENST00000484112 POMT1Q9Y6A1 747 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms