RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 Q71RC1 249 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-204ENST00000483941 MOGAT3Q86VF5 341 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 SNX29P2Q8IUI4 249 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 LRRC29Q8WV35 223 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 SMIM4Q8WVI0 70 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 THAP7Q9BT49 309 aaPredicted RBP11.79□□□□□ -0.52
SMAD9-204ENST00000483941 LIME1Q9H400 295 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 AUNIPQ9H7T9 357 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 HES4Q9HCC6 221 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 RBFOX1Q9NWB1 397 aaKnown RBP11.79□□□□□ -0.52
SMAD9-204ENST00000483941 EDARQ9UNE0 448 aa11.79□□□□□ -0.52
SMAD9-204ENST00000483941 FN1P02751 2386 aaKnown RBP11.79□□□□□ -0.52
SMAD9-204ENST00000483941 CENPXA8MT69 81 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 SRRM5B3KS81 715 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 H7C1Q1 480 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 J3QRK9 145 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 GEMIN2O14893 280 aaKnown RBP11.78□□□□□ -0.52
SMAD9-204ENST00000483941 DEGS1O15121 323 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 LPLP06858 475 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 DANCRP0C864 163 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 ACTBP60709 375 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 ACTG1P63261 375 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 CCL8P80075 99 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 IKZF1Q13422 519 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 ZNF260Q3ZCT1 412 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 PPP1R35Q8TAP8 253 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 SETD6Q8TBK2 473 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 GTF3AQ92664 365 aaKnown RBP11.78□□□□□ -0.52
SMAD9-204ENST00000483941 VRK1Q99986 396 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-204ENST00000483941 TRAF4Q9BUZ4 470 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-204ENST00000483941 CLEC4MQ9H2X3 399 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-204ENST00000483941 RIMS4Q9H426 269 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-204ENST00000483941 UBTD1Q9HAC8 227 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 ABCB10Q9NRK6 738 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 DNAJB11Q9UBS4 358 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 ZNF107Q9UII5 783 aaPredicted RBP11.78□□□□□ -0.52
SMAD9-204ENST00000483941 CSPG4Q6UVK1 2322 aa11.78□□□□□ -0.52
SMAD9-204ENST00000483941 MCRIP1C9JLW8 97 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 SOCS1O15524 211 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 LHBP01229 141 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 MUC1P15941 1255 aaPredicted RBP11.77□□□□□ -0.53
SMAD9-204ENST00000483941 KCNJ3P48549 501 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 ARFRP1Q13795 201 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 MICBQ29980 383 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 HFEQ30201 348 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 PIGYQ3MUY2 71 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 NKAPLQ5M9Q1 402 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 ATAD3CQ5T2N8 411 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 ACP7Q6ZNF0 438 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 PEG10Q86TG7 708 aaKnown RBP11.77□□□□□ -0.53
SMAD9-204ENST00000483941 IZUMO1Q8IYV9 350 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 ARHGAP5-AS1Q96IT6 56 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 SMR3AQ99954 134 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 NICN1Q9BSH3 213 aa11.77□□□□□ -0.53
SMAD9-204ENST00000483941 COL6A5A8TX70 2615 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 TRAV38-1A0A0B4J264 116 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 IGHV1-69-2A0A0G2JMI3 117 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 FOXI3A8MTJ6 420 aaPredicted RBP11.76□□□□□ -0.53
SMAD9-204ENST00000483941 H7C417 338 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 MFNGO00587 321 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 CD3GP09693 182 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 IL7P13232 177 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 ZNF44P15621 663 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 GNB3P16520 340 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 CHATP28329 748 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 FAUP35544 74 aaKnown RBP11.76□□□□□ -0.53
SMAD9-204ENST00000483941 MDH2P40926 338 aaKnown RBP11.76□□□□□ -0.53
SMAD9-204ENST00000483941 TMEM50BP56557 158 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 MOGAT2Q3SYC2 334 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 C11orf71Q6IPW1 123 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 DNM1P46Q6ZS02 220 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 ZNF826PQ6ZT77 177 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 TOMM5Q8N4H5 51 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 DTX3Q8N9I9 347 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 MBD6Q96DN6 1003 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 COX4I2Q96KJ9 171 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 MDFIQ99750 246 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 C7orf50Q9BRJ6 194 aaKnown RBP11.76□□□□□ -0.53
SMAD9-204ENST00000483941 PECRQ9BY49 303 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 CHST6Q9GZX3 395 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 NLKQ9UBE8 527 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 MTFP1Q9UDX5 166 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 LAMP3Q9UQV4 416 aa11.76□□□□□ -0.53
SMAD9-204ENST00000483941 FBN1P35555 2871 aaKnown RBP11.76□□□□□ -0.53
SMAD9-204ENST00000483941 A0A0A6YYD4 124 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 IGHV3-64DA0A0J9YX35 117 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 NDUFA2O43678 99 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 FSTL3O95633 263 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 HAND1O96004 215 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 CSF1P09603 554 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 CSF3P09919 207 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 LMO1P25800 156 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 PLAC9Q5JTB6 97 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 ZNF57Q68EA5 555 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-204ENST00000483941 MZT2BQ6NZ67 158 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 CLEC9AQ6UXN8 241 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 WFDC11Q8NEX6 87 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 NEK7Q8TDX7 302 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 GPX8Q8TED1 209 aa11.75□□□□□ -0.53
SMAD9-204ENST00000483941 ST8SIA4Q92187 359 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms