RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TEX47Q8TBZ9 253 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 TOMM40LQ969M1 308 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 CREB3L1Q96BA8 519 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 NIPSNAP1Q9BPW8 284 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 RBFOX1Q9NWB1 397 aaKnown RBP8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 GTF2A1LQ9UNN4 478 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 COPS3Q9UNS2 423 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 SLC7A11Q9UPY5 501 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 A0A087X0M5 115 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 TRGV10A0A0A0MS01 117 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 A0A1B0GX30 115 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 TRIM64CA6NLI5 447 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 H3BN98 237 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 H3BSH0 61 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 SIRPB1O00241 398 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 CCRL2O00421 344 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 MAGEB4O15481 346 aaPredicted RBP8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 FGF16O43320 207 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 IGHV3-7P01780 117 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 MRPL3P09001 348 aaKnown RBP8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 HSD17B1P14061 328 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 SLC2A5P22732 501 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 PRRX1P54821 245 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 RPS7P62081 194 aaKnown RBP8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 ROM1Q03395 351 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 AESQ08117 197 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 GPR50Q13585 617 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 KPNB1Q14974 876 aaKnown RBP8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 UBE2V2Q15819 145 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 MICAQ29983 383 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 ZNF829Q3KNS6 432 aaPredicted RBP8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 CXorf66Q5JRM2 361 aaPredicted RBP8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 ASPHD1Q5U4P2 390 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 PLEKHG7Q6ZR37 379 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 ZNF679Q8IYX0 411 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 RNF152Q8N8N0 203 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 CORO2AQ92828 525 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 RPEQ96AT9 228 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 ISOC1Q96CN7 298 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 TM2D3Q9BRN9 247 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 MROQ9BYG7 248 aa8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 SEBOXQ9HB31 216 aaPredicted RBP8.48□□□□□ -1.05
SMARCC1-205ENST00000483847 LOC110117498-PIK3R3F6TDL0 507 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 AP4M1O00189 453 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 ENTPD6O75354 484 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 ZNF254O75437 659 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 IGKV1D-33P01593 117 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 IGKV1-33P01594 117 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 SPNP16150 400 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 BCL3P20749 454 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 NFYBP25208 207 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 MAGEA2P43356 314 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 GPR12P47775 334 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 RIDAP52758 137 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 FOXE3Q13461 319 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 APOFQ13790 326 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 GINS1Q14691 196 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 C17orf58Q2M2W7 97 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 BCL2L15Q5TBC7 163 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 Q6ZSR3 168 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 ELMOD2Q8IZ81 293 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM58AQ8N1B3 248 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 OR11H1Q8NG94 326 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 C4orf3Q8WVX3 66 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 LEAP2Q969E1 77 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 RNFT2Q96EX2 444 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 YIPF3Q9GZM5 350 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 ING3Q9NXR8 418 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 TAS2R3Q9NYW6 316 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 IKZF2Q9UKS7 526 aa8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 SAMHD1Q9Y3Z3 626 aaKnown RBP8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 SIRT4Q9Y6E7 314 aaPredicted RBP8.47□□□□□ -1.05
SMARCC1-205ENST00000483847 ODAMA1E959 279 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 CCDC22O60826 627 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 PRKACAP17612 351 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 PTGFRP43088 359 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 INSL3P51460 131 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 CFHR3Q02985 330 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 ZNF146Q15072 292 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 SLC35D3Q5M8T2 416 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 FAM27D1Q5T7N8 215 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 FAM53AQ6NSI3 398 aaPredicted RBP8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 CD300LDQ6UXZ3 194 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 CYP2R1Q6VVX0 501 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 ENTHD1Q8IYW4 607 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 OR10G2Q8NGC3 310 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 OR4D6Q8NGJ1 314 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 OR9G1Q8NH87 305 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 COQ2Q96H96 371 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 KIRREL1Q96J84 757 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 FEVQ99581 238 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 APOL4Q9BPW4 351 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 ISYNA1Q9NPH2 558 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 OR52A1Q9UKL2 312 aa8.46□□□□□ -1.06
SMARCC1-205ENST00000483847 TRBV2A0A0J9YWF9 115 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 CCDC182A6NF36 153 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 DHRS7CA6NNS2 312 aa8.45□□□□□ -1.06
SMARCC1-205ENST00000483847 J3QR06 171 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms