RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 POC1AQ8NBT0 407 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 CCDC107Q8WV48 283 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 MAFIPQ8WZ33 124 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 PPA2Q9H2U2 334 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 ZNF442Q9H7R0 627 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 FN3KRPQ9HA64 309 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 MSL2Q9HCI7 577 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 ZNF701Q9NV72 531 aaPredicted RBP11.91□□□□□ -0.5
CLK3-204ENST00000483723 GPR132Q9UNW8 380 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 SPENQ96T58 3664 aaKnown RBP11.91□□□□□ -0.5
CLK3-204ENST00000483723 BOD1L1Q8NFC6 3051 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 MEIKINA0A087WXM9 373 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 F5H5P2 479 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 GRPP07492 148 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 CXCL3P19876 107 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 CD200P41217 278 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 ASCL1P50553 236 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 CHRFAM7AQ494W8 412 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 ZNF660Q6AZW8 331 aaPredicted RBP11.9□□□□□ -0.5
CLK3-204ENST00000483723 FAHD2BQ6P2I3 314 aaPredicted RBP11.9□□□□□ -0.5
CLK3-204ENST00000483723 PEG10Q86TG7 708 aaKnown RBP11.9□□□□□ -0.5
CLK3-204ENST00000483723 TMEM17Q86X19 198 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 DYRK2Q92630 601 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 FAHD2AQ96GK7 314 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 C12orf4Q9NQ89 552 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 DECR2Q9NUI1 292 aa11.9□□□□□ -0.5
CLK3-204ENST00000483723 PIEZO2Q9H5I5 2752 aa11.9□□□□□ -0.51
CLK3-204ENST00000483723 TRBV6-6A0A0A6YYG2 114 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 TRAV24A0A0B4J272 114 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 MCRIP1C9JLW8 97 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 CCL21O00585 134 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 SSNA1O43805 119 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 OR4E1P0C645 316 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 DUSP1P28562 367 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 KLF3P57682 345 aaPredicted RBP11.89□□□□□ -0.51
CLK3-204ENST00000483723 IKZF1Q13422 519 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 LY6DQ14210 128 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 AADACL3Q5VUY0 350 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 SHEQ5VZ18 495 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 DHRS11Q6UWP2 260 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 SUMF2Q8NBJ7 301 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 OR52B4Q8NGK2 314 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 ZNF431Q8TF32 576 aaPredicted RBP11.89□□□□□ -0.51
CLK3-204ENST00000483723 CAPSLQ8WWF8 208 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 DACT3Q96B18 629 aaPredicted RBP11.89□□□□□ -0.51
CLK3-204ENST00000483723 DMRTB1Q96MA1 342 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 RIMS4Q9H426 269 aaPredicted RBP11.89□□□□□ -0.51
CLK3-204ENST00000483723 EHFQ9NZC4 300 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 POM121CA8CG34 1229 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 ERVH48-1M5A8F1 160 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 SDCBPO00560 298 aaPredicted RBP11.89□□□□□ -0.51
CLK3-204ENST00000483723 C1QBP02746 253 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 CFHR2P36980 270 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 TSPAN5P62079 268 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 DHODHQ02127 395 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 ZFP69Q49AA0 526 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 WDR82Q6UXN9 313 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 NOXA1Q86UR1 476 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 WFDC8Q8IUA0 241 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 MUC20Q8N307 709 aaPredicted RBP11.89□□□□□ -0.51
CLK3-204ENST00000483723 TMEM185AQ8NFB2 350 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 WFIKKN1Q96NZ8 548 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 SCGB3A2Q96PL1 93 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 ZNF286AQ9HBT8 521 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 Q9N2K0 584 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 DUSP13Q9UII6 198 aa11.89□□□□□ -0.51
CLK3-204ENST00000483723 ZSCAN5BA6NJL1 495 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 C3orf80F5H4A9 247 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 DEGS1O15121 323 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 ZBTB25P24278 435 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 FPR2P25090 351 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 LMO1P25800 156 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 CHRNB4P30926 498 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 RBM39Q14498 530 aaKnown RBP11.88□□□□□ -0.51
CLK3-204ENST00000483723 SURF2Q15527 256 aaPredicted RBP11.88□□□□□ -0.51
CLK3-204ENST00000483723 MPPED2Q15777 294 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 SPIN3Q5JUX0 258 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 ZNF880Q6PDB4 577 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 LILRB4Q8NHJ6 448 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 MARCH1Q8TCQ1 289 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 MRPL24Q96A35 216 aaKnown RBP11.88□□□□□ -0.51
CLK3-204ENST00000483723 MRPL37Q9BZE1 423 aaKnown RBP11.88□□□□□ -0.51
CLK3-204ENST00000483723 TREM2Q9NZC2 230 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 ZNF69Q9UC07 566 aa11.88□□□□□ -0.51
CLK3-204ENST00000483723 POLEQ07864 2286 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 FAM221AA4D161 298 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 OR5H14A6NHG9 310 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 OR2A4O95047 310 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 NXPH2O95156 264 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 ANXA3P12429 323 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 GZMKP49863 264 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 UBE2MP61081 183 aaKnown RBP11.87□□□□□ -0.51
CLK3-204ENST00000483723 ADORA2A-AS1P86434 159 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 PRAMEF6Q5VXH4 476 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 ZNF826PQ6ZT77 177 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 TMED4Q7Z7H5 227 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 OR10Z1Q8NGY1 313 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 OR2A7Q96R45 310 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 DHRS9Q9BPW9 319 aa11.87□□□□□ -0.51
CLK3-204ENST00000483723 DPCDQ9BVM2 203 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms