RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SPRR3Q9UBC9 169 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 FLVCR2Q9UPI3 526 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 RNF115Q9Y4L5 304 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 V9GYS6 101 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 OR2F2O95006 317 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 OR8U8P0C7N1 319 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 FAM3AP98173 230 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 TCF15Q12870 199 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 OR2F1Q13607 317 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 SLC51BQ86UW2 128 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 ADTRPQ96IZ2 230 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 PYCARD-AS1I3L0S3 204 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 PLEKHA2Q9HB19 425 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 PLEKHA3Q9HB20 300 aa16.69■□□□□ 0.26
CCM2-214ENST00000481194 PRRX1P54821 245 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 NHLH1Q02575 133 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 MS4A3Q96HJ5 214 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 MUC22E2RYF6 1773 aaPredicted RBP16.68■□□□□ 0.26
CCM2-214ENST00000481194 CTSDP07339 412 aaPredicted RBP16.68■□□□□ 0.26
CCM2-214ENST00000481194 S100A2P29034 98 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 S100A11P31949 105 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 C19orf57Q0VDD7 668 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 VWA1Q6PCB0 445 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 SPICQ8N5J4 248 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 C9orf106Q8NAJ2 232 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 ETV2O00321 342 aaPredicted RBP16.68■□□□□ 0.26
CCM2-214ENST00000481194 IL18BPO95998 194 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 PDLIM3Q53GG5 364 aaPredicted RBP16.68■□□□□ 0.26
CCM2-214ENST00000481194 OR4A4PQ8NGN8 299 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 C1QTNF5Q9BXJ0 243 aa16.68■□□□□ 0.26
CCM2-214ENST00000481194 EIF5A2Q9GZV4 153 aaKnown RBP16.68■□□□□ 0.26
CCM2-214ENST00000481194 ZNF230Q9UIE0 474 aaPredicted RBP16.68■□□□□ 0.26
CCM2-214ENST00000481194 SPTBP11277 2137 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 SFT2D2O95562 160 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 FABP1P07148 127 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 RPS2P15880 293 aaKnown RBP16.67■□□□□ 0.26
CCM2-214ENST00000481194 HTR2BP41595 481 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 PRSS12P56730 875 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 FOXO1Q12778 655 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 SUMF2Q8NBJ7 301 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 ZDHHC11Q9H8X9 412 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 FAM212BQ9NTI7 297 aaPredicted RBP16.67■□□□□ 0.26
CCM2-214ENST00000481194 TUBD1Q9UJT1 453 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 PSMB6P28072 239 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 EFNB1P98172 346 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 RPUSD3Q6P087 351 aaKnown RBP16.67■□□□□ 0.26
CCM2-214ENST00000481194 TMEM171Q8WVE6 324 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 C3orf80F5H4A9 247 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 HLA-DRB3P79483 266 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 DHRS9Q9BPW9 319 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 KCNK15Q9H427 330 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 WIPI2Q9Y4P8 454 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 E5RGE8 158 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 IGHG3P01860 377 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 PDCD1Q15116 288 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 HOGA1Q86XE5 327 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 KLF14Q8TD94 323 aaPredicted RBP16.67■□□□□ 0.26
CCM2-214ENST00000481194 SMIM3Q9BZL3 60 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 RAB18Q9NP72 206 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 NSG2Q9Y328 171 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 TMED3Q9Y3Q3 217 aa16.67■□□□□ 0.26
CCM2-214ENST00000481194 IGKV1D-43A0A0B4J1Z2 117 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 ALX3O95076 343 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 TIMP3P35625 211 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 NAAAQ02083 359 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 DTX1Q86Y01 620 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 SHISA5Q8N114 240 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 MSL2Q9HCI7 577 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 ASCL3Q9NQ33 180 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 BAMBIQ13145 260 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 ONECUT1Q9UBC0 465 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 IL19Q9UHD0 177 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 EFNA2O43921 213 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 SHEQ5VZ18 495 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 BTNL3Q6UXE8 466 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 PPIAL4EA0A075B759 164 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 E9PLN8 166 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 PPIAL4DF5H284 164 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 PPIAL4FP0DN26 164 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 MPPED2Q15777 294 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 Q6ZS92 163 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 DDOQ99489 341 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 VKORC1Q9BQB6 163 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 MARVELD1Q9BSK0 173 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 PPIAL4AQ9Y536 164 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 ADH4P08319 380 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 IGHV1-2P23083 117 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 ZNF362Q5T0B9 420 aaPredicted RBP16.66■□□□□ 0.26
CCM2-214ENST00000481194 ZBTB34Q8NCN2 500 aa16.66■□□□□ 0.26
CCM2-214ENST00000481194 OR4A8P0C604 315 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 COX6B1P14854 86 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 SLC6A1P30531 599 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 GLRXP35754 106 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 CEACAM3P40198 252 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 ESCO2Q56NI9 601 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 ZNF626Q68DY1 528 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 NAA60Q9H7X0 242 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 PIN1P1O15428 100 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 NDUFA2O43678 99 aa16.65■□□□□ 0.26
CCM2-214ENST00000481194 J3QRE1 110 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms