RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 PRRT1Q99946 306 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 THUMPD3Q9BV44 507 aaKnown RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 MFFQ9GZY8 342 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 WDR41Q9HAD4 459 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 NMNAT1Q9HAN9 279 aaPredicted RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 CACYBPQ9HB71 228 aaKnown RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 RAB9BQ9NP90 201 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 SLCO1B3Q9NPD5 702 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 PNO1Q9NRX1 252 aaKnown RBP4.97□□□□□ -1.61
CBX3-206ENST00000481057 TREX1Q9NSU2 369 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 CALML5Q9NZT1 146 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 GHRLQ9UBU3 117 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 ANAPC7Q9UJX3 599 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 RNF24Q9Y225 148 aa4.97□□□□□ -1.61
CBX3-206ENST00000481057 DOCK11Q5JSL3 2073 aa4.96□□□□□ -1.61
CBX3-206ENST00000481057 TRAV18A0A075B6X5 111 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 A0A087WZ39 114 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 GLYATL1P3A0A0U1RQE8 302 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 A0A1B0GVY2 172 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 CIB4A0PJX0 185 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 ZNF860A6NHJ4 632 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 A8MVM7 634 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 TEX46H3BTG2 121 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 SOCS3O14543 225 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 CHST10O43529 356 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 TPST1O60507 370 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 LYPLA1O75608 230 aaPredicted RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 RHBDL1O75783 438 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 LHBP01229 141 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 SPNP16150 400 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 UQCRC2P22695 453 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 MYL9P24844 172 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 ARR3P36575 388 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 TGM4P49221 684 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 PRKXP51817 358 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 PLA2G16P53816 162 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 ATP5IP56385 69 aaPredicted RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 TMEM50BP56557 158 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 CLDN8P56748 225 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 EMX1Q04741 257 aaPredicted RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 IL24Q13007 206 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 IL18Q14116 193 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 GK2Q14410 553 aaPredicted RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 TRAM1Q15629 374 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 DUSP5Q16690 384 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 GUK1Q16774 197 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 ACTBL2Q562R1 376 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 SPATA46Q5T0L3 261 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 LPCAT3Q6P1A2 487 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 AFTPHQ6ULP2 937 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 UQCC3Q6UW78 93 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 NHLRC1Q6VVB1 395 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 GPR137CQ8N3F9 429 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 AQP11Q8NBQ7 271 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 C17orf47Q8NEP4 570 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 OR4F17Q8NGA8 305 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 OR5D18Q8NGL1 313 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 OR2V1Q8NHB1 315 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 C11orf45Q8TAV5 145 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 FNDC9Q8TBE3 224 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 ZNF431Q8TF32 576 aaPredicted RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 C16orf78Q8WTQ4 265 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 TSEN15Q8WW01 171 aaKnown RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 CREB3L1Q96BA8 519 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 SMIM12Q96EX1 92 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 CNRIP1Q96F85 164 aaPredicted RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 C18orf15Q96N68 181 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 OR4F4Q96R69 305 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 AIF1LQ9BQI0 150 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 EBF4Q9BQW3 602 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 ALKBH7Q9BT30 221 aaPredicted RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 FUNDC2Q9BWH2 189 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 MRPL13Q9BYD1 178 aaKnown RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 NAA50Q9GZZ1 169 aaKnown RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 COMMD4Q9H0A8 199 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 DCSTAMPQ9H295 470 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 C16orf95Q9H693 158 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 FBXO6Q9NRD1 293 aaPredicted RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 NUDT4Q9NZJ9 180 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 NAGKQ9UJ70 344 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 MRPS18CQ9Y3D5 142 aaKnown RBP4.96□□□□□ -1.62
CBX3-206ENST00000481057 U3KQV3 271 aa4.96□□□□□ -1.62
CBX3-206ENST00000481057 MYCBP2O75592 4640 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 ARHGAP32A7KAX9 2087 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 A0A1B0GVI7 797 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 E5RGE8 158 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 NPIPB9F8W1W9 429 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 K7EP13 123 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 FOXE1O00358 373 aaPredicted RBP4.95□□□□□ -1.62
CBX3-206ENST00000481057 CCSO14618 274 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 PDCD5O14737 125 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 MYL12BO14950 172 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 ARPC5O15511 151 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 CFLARO15519 480 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 TYROBPO43914 113 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 AK1P00568 194 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 MELTFP08582 738 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 OR56A5P0C7T3 313 aa4.95□□□□□ -1.62
CBX3-206ENST00000481057 HIST1H1BP16401 226 aaKnown RBP4.95□□□□□ -1.62
CBX3-206ENST00000481057 ZNF25P17030 456 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms