RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 HNF1AP20823 631 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 GADD45AP24522 165 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 CFPP27918 469 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 PAX8Q06710 450 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 SLC22A6Q4U2R8 563 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 FAM120AOSQ5T036 256 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 FAHD2BQ6P2I3 314 aaPredicted RBP16.33■□□□□ 0.2
LIME1-205ENST00000480139 GDPGP1Q6ZNW5 385 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 LINC00596Q86U02 117 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 OR8H2Q8N162 312 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 TEX29Q8N6K0 151 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 ASCC1Q8N9N2 400 aaKnown RBP16.33■□□□□ 0.2
LIME1-205ENST00000480139 LY6G5BQ8NDX9 201 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 OR5D13Q8NGL4 314 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 YIPF6Q96EC8 236 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 FAHD2AQ96GK7 314 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 OR51E2Q9H255 320 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 IFT22Q9H7X7 185 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 CDC42EP3Q9UKI2 254 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 AK6Q9Y3D8 172 aaKnown RBP16.33■□□□□ 0.2
LIME1-205ENST00000480139 WNK2Q9Y3S1 2297 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 SHISA3A0PJX4 238 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 SLC17A2O00624 439 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 PPIAL4GP0DN37 164 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 NDUFB7P17568 137 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 SERPINA2P20848 420 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 HTR2CP28335 458 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 DUSP1P28562 367 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 CAPZA1P52907 286 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 SNU13P55769 128 aaKnown RBP16.32■□□□□ 0.2
LIME1-205ENST00000480139 RBM11P57052 281 aaKnown RBP16.32■□□□□ 0.2
LIME1-205ENST00000480139 Q6P435 159 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 C17orf107Q6ZR85 190 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 PPP1R35Q8TAP8 253 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 CHCHD6Q9BRQ6 235 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 MRI1Q9BV20 369 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 SHARPINQ9H0F6 387 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 C7orf69Q9H7B7 122 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 ST3GAL6Q9Y274 331 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 V9GY05 133 aa16.32■□□□□ 0.2
LIME1-205ENST00000480139 FN1P02751 2386 aaKnown RBP16.31■□□□□ 0.2
LIME1-205ENST00000480139 TMEM82A0PJX8 343 aa16.31■□□□□ 0.2
LIME1-205ENST00000480139 BPNT1O95861 308 aa16.31■□□□□ 0.2
LIME1-205ENST00000480139 MPV17LQ2QL34 196 aa16.31■□□□□ 0.2
LIME1-205ENST00000480139 PIGYQ3MUY2 71 aa16.31■□□□□ 0.2
LIME1-205ENST00000480139 TPRA1Q86W33 373 aa16.31■□□□□ 0.2
LIME1-205ENST00000480139 H1FXQ92522 213 aaKnown RBP16.31■□□□□ 0.2
LIME1-205ENST00000480139 SLC25A28Q96A46 364 aa16.31■□□□□ 0.2
LIME1-205ENST00000480139 KCTD7Q96MP8 289 aa16.31■□□□□ 0.2
LIME1-205ENST00000480139 CST11Q9H112 138 aa16.31■□□□□ 0.2
LIME1-205ENST00000480139 OPN4Q9UHM6 478 aa16.31■□□□□ 0.2
LIME1-205ENST00000480139 A0A0G2JK05 382 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 A0A1W2PP11 408 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 SIRPB1O00241 398 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 DEGS1O15121 323 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 PSPNO60542 156 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 CRLF1O75462 422 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 CSN2P05814 226 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 ZNF44P15621 663 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 RAB3BP20337 219 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 GABRR1P24046 479 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 KIR3DL3Q8N743 410 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 OR13F1Q8NGS4 319 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 POM121Q96HA1 1249 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 PLGRKTQ9HBL7 147 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 AUP1Q9Y679 476 aa16.3■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A10PA6NDY2 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A18PA6NE21 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A16PA6NEW6 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A20PA6NIJ5 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A8PA6NJQ4 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A7PA6NKC0 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A22PA8MWA6 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A12PA8MX19 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A5PA8MXJ8 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A23PA8MXZ1 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 SLC33A1O00400 549 aaPredicted RBP16.29■□□□□ 0.2
LIME1-205ENST00000480139 MGST3O14880 152 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 AVPP01185 164 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A15PP0C7V4 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A13PP0C7W8 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A14PP0C7W9 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 FAM90A24PP0C7X0 464 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 MGMTP16455 207 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 OR3A1P47881 315 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 GRK1Q15835 563 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 C1orf229Q6ZS94 237 aaPredicted RBP16.29■□□□□ 0.2
LIME1-205ENST00000480139 GDPD3Q7L5L3 318 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 KCNG3Q8TAE7 436 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 BEX2Q9BXY8 128 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 KPTNQ9Y664 436 aa16.29■□□□□ 0.2
LIME1-205ENST00000480139 DSCAML1Q8TD84 2053 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 LOC100506127A0A0U1RQW1 187 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 GEMIN2O14893 280 aaKnown RBP16.28■□□□□ 0.2
LIME1-205ENST00000480139 CRTAPO75718 401 aaPredicted RBP16.28■□□□□ 0.2
LIME1-205ENST00000480139 VSIG8P0DPA2 414 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 ERP29P30040 261 aaKnown RBP16.28■□□□□ 0.2
LIME1-205ENST00000480139 RPL31P62899 125 aaKnown RBP16.28■□□□□ 0.2
LIME1-205ENST00000480139 QRFPP83859 136 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 PAX5Q02548 391 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms