RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 MCRIP1C9JLW8 97 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 SH2D1BO14796 132 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 CA11O75493 328 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 OR2H2O95918 312 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 CYB5R3P00387 301 aaPredicted RBP9.44□□□□□ -0.9
APTX-223ENST00000479656 LHBP01229 141 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 TFF1P04155 84 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 TNFRSF1AP19438 455 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 HLA-DMAP28067 261 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 CEBPDP49716 269 aaPredicted RBP9.44□□□□□ -0.9
APTX-223ENST00000479656 FAM209AQ5JX71 171 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 FAM201AQ5SY85 155 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 OR52W1Q6IF63 320 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 CCBE1Q6UXH8 406 aaPredicted RBP9.44□□□□□ -0.9
APTX-223ENST00000479656 Q6ZNX1 250 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 TMEM229BQ8NBD8 167 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 RDH5Q92781 318 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 ERGIC1Q969X5 290 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 RCC2Q9P258 522 aaKnown RBP9.44□□□□□ -0.9
APTX-223ENST00000479656 RNF7Q9UBF6 113 aa9.44□□□□□ -0.9
APTX-223ENST00000479656 IGHV3OR15-7A0A075B7D8 119 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 FAM240BA0A1B0GVZ2 78 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 RFPL4AA6NLU0 287 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 A6NNC1 897 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 RFPL4AL1F8VTS6 287 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.43□□□□□ -0.9
APTX-223ENST00000479656 SIRPB1O00241 398 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 HAND1O96004 215 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 BTCP35070 178 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 RCVRNP35243 200 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 SNRPD2P62316 118 aaKnown RBP9.43□□□□□ -0.9
APTX-223ENST00000479656 MRPS15P82914 257 aaKnown RBP9.43□□□□□ -0.9
APTX-223ENST00000479656 TESK1Q15569 626 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 SPIN3Q5JUX0 258 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 STEAP1BQ6NZ63 245 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 FIP1L1Q6UN15 594 aaKnown RBP9.43□□□□□ -0.9
APTX-223ENST00000479656 MINDY2Q8NBR6 621 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 OR4D10Q8NGI6 311 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 ENKURQ8TC29 256 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 NEK7Q8TDX7 302 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 MAFIPQ8WZ33 124 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 VRK1Q99986 396 aaPredicted RBP9.43□□□□□ -0.9
APTX-223ENST00000479656 EGLN1Q9GZT9 426 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 MMP28Q9H239 520 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 SAP30LQ9HAJ7 183 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 ETAA1Q9NY74 926 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 RASL12Q9NYN1 266 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 NLKQ9UBE8 527 aa9.43□□□□□ -0.9
APTX-223ENST00000479656 KLF2Q9Y5W3 355 aaPredicted RBP9.43□□□□□ -0.9
APTX-223ENST00000479656 ZNF736B4DX44 427 aaPredicted RBP9.42□□□□□ -0.9
APTX-223ENST00000479656 M0QYG6 137 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 SLC33A1O00400 549 aaPredicted RBP9.42□□□□□ -0.9
APTX-223ENST00000479656 ZNF205O95201 554 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 KNG1P01042 644 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 CD8AP01732 235 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 AKAIN1P0CW23 69 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 GIFP27352 417 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 CBX5P45973 191 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 CCR6P51684 374 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 TAS2R19P59542 299 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 OR4C16Q8NGL9 310 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 OR11L1Q8NGX0 322 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 Q8TCH9 128 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 C7orf50Q9BRJ6 194 aaKnown RBP9.42□□□□□ -0.9
APTX-223ENST00000479656 DPCDQ9BVM2 203 aaPredicted RBP9.42□□□□□ -0.9
APTX-223ENST00000479656 IFT22Q9H7X7 185 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 SPACA1Q9HBV2 294 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 CBLN4Q9NTU7 201 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 ZNF701Q9NV72 531 aaPredicted RBP9.42□□□□□ -0.9
APTX-223ENST00000479656 MCUBQ9NWR8 336 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 DCAF16Q9NXF7 216 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 GLS2Q9UI32 602 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 ROS1P08922 2347 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 SPTBN1Q01082 2364 aaKnown RBP9.42□□□□□ -0.9
APTX-223ENST00000479656 KMT2BQ9UMN6 2715 aaPredicted RBP9.42□□□□□ -0.9
APTX-223ENST00000479656 hCG_2014768A0A024R1R8 64 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 H3BUI4 141 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 RAB3DO95716 219 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 HPXP02790 462 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 SOD3P08294 240 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 PSG2P11465 335 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 IRF2P14316 349 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 NAT1P18440 290 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 SLC6A1P30531 599 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 CD80P33681 288 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 SMIM21Q3B7S5 101 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 AGAP6Q5VW22 663 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 HOGA1Q86XE5 327 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 DUSP18Q8NEJ0 188 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 OR56B4Q8NH76 319 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 CCL17Q92583 94 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 SNAPC3Q92966 411 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 CACNG6Q9BXT2 260 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 TINAGL1Q9GZM7 467 aaPredicted RBP9.42□□□□□ -0.9
APTX-223ENST00000479656 ING3Q9NXR8 418 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 DNAJB11Q9UBS4 358 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 ANAPC10Q9UM13 185 aa9.42□□□□□ -0.9
APTX-223ENST00000479656 WIPI2Q9Y4P8 454 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms