RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 FAM90A14PP0C7W9 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM90A24PP0C7X0 464 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 CPT2P23786 658 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 ATP5J2P56134 94 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 TAS2R20P59543 309 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 MPV17LQ2QL34 196 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 DEFB113Q30KQ7 82 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 SMIM21Q3B7S5 101 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 ZNF260Q3ZCT1 412 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 SPIN3Q5JUX0 258 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 ZNF788Q6ZQV5 615 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 C17orf107Q6ZR85 190 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 C6orf201Q7Z4U5 140 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 FAM216BQ8N7L0 139 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 OR10R2Q8NGX6 335 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 RAB40AQ8WXH6 277 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 ST8SIA4Q92187 359 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 MBD6Q96DN6 1003 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 SDSLQ96GA7 329 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 ARHGAP5-AS1Q96IT6 56 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 SDHCQ99643 169 aaPredicted RBP10.93□□□□□ -0.66
CHD3-210ENST00000479080 PECRQ9BY49 303 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 CHODLQ9H9P2 273 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 SEBOXQ9HB31 216 aaPredicted RBP10.93□□□□□ -0.66
CHD3-210ENST00000479080 OR14J1Q9UGF5 321 aa10.93□□□□□ -0.66
CHD3-210ENST00000479080 A0A0G2JMP0 313 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 A0A0X1KG70 313 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 LRRC30A6NM36 301 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 VWC2LB2RUY7 222 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 FAM25AB3EWG3 89 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 FAM25CB3EWG5 89 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 FAM25GB3EWG6 89 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 CLDN25C9JDP6 229 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 XRCC3O43542 346 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 PDCD6O75340 191 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 OR7C1O76099 320 aaPredicted RBP10.92□□□□□ -0.66
CHD3-210ENST00000479080 FSTL3O95633 263 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 IRF2P14316 349 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 MUC1P15941 1255 aaPredicted RBP10.92□□□□□ -0.66
CHD3-210ENST00000479080 HIST1H1DP16402 221 aaKnown RBP10.92□□□□□ -0.66
CHD3-210ENST00000479080 LMO1P25800 156 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 GIFP27352 417 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 BLVRBP30043 206 aaPredicted RBP10.92□□□□□ -0.66
CHD3-210ENST00000479080 PRDX2P32119 198 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 MNDAP41218 407 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 OR3A1P47881 315 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 PITPNBP48739 271 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 COL10A1Q03692 680 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 IKZF1Q13422 519 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 ATPAF1Q5TC12 328 aaPredicted RBP10.92□□□□□ -0.66
CHD3-210ENST00000479080 C1orf87Q8N0U7 546 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 OR4S1Q8NGB4 309 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 OR4M2Q8NGB6 313 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 PLPPR1Q8TBJ4 325 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 C10orf105Q8TEF2 133 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 ABHD1Q96SE0 405 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 CCL13Q99616 98 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 URM1Q9BTM9 101 aaKnown RBP10.92□□□□□ -0.66
CHD3-210ENST00000479080 BPESC1Q9GZL8 116 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 SHARPINQ9H0F6 387 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 ZMAT3Q9HA38 289 aaKnown RBP10.92□□□□□ -0.66
CHD3-210ENST00000479080 BEX4Q9NWD9 120 aaPredicted RBP10.92□□□□□ -0.66
CHD3-210ENST00000479080 DNAJB11Q9UBS4 358 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 VPS13CQ709C8 3753 aa10.92□□□□□ -0.66
CHD3-210ENST00000479080 TRAV18A0A075B6X5 111 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 IGHV4-30-2A0A087WSY4 118 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 A0A096LNT2 108 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 TMEM235A6NFC5 223 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 CEACAM18A8MTB9 384 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 F5H0A9 414 aaPredicted RBP10.91□□□□□ -0.66
CHD3-210ENST00000479080 PPIHO43447 177 aaKnown RBP10.91□□□□□ -0.66
CHD3-210ENST00000479080 SSX5O60225 188 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 CHRM2P08172 466 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 GNB3P16520 340 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 GUCA2AQ02747 115 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 CARTPTQ16568 116 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 MICBQ29980 383 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 NKAPLQ5M9Q1 402 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 LINC00299Q6ZSB3 139 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 LINC00596Q86U02 117 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 SUMF2Q8NBJ7 301 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 OR56B1Q8NGI3 324 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 COQ2Q96H96 371 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 POM121Q96HA1 1249 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 DIRAS2Q96HU8 199 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 NUDT16L1Q9BRJ7 211 aaKnown RBP10.91□□□□□ -0.66
CHD3-210ENST00000479080 HDHD3Q9BSH5 251 aaPredicted RBP10.91□□□□□ -0.66
CHD3-210ENST00000479080 AUNIPQ9H7T9 357 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHD3-210ENST00000479080 PCDHB16Q9NRJ7 776 aa10.91□□□□□ -0.66
CHD3-210ENST00000479080 A0A0A6YYH2 397 aa10.9□□□□□ -0.66
CHD3-210ENST00000479080 TRAV38-1A0A0B4J264 116 aa10.9□□□□□ -0.66
CHD3-210ENST00000479080 MEIOCA2RUB1 952 aa10.9□□□□□ -0.66
CHD3-210ENST00000479080 A6NJ64 397 aa10.9□□□□□ -0.66
CHD3-210ENST00000479080 HSPB6O14558 160 aa10.9□□□□□ -0.66
CHD3-210ENST00000479080 SIGLEC5O15389 551 aa10.9□□□□□ -0.66
CHD3-210ENST00000479080 ZNF44P15621 663 aa10.9□□□□□ -0.66
CHD3-210ENST00000479080 FUT3P21217 361 aa10.9□□□□□ -0.66
CHD3-210ENST00000479080 DNASE1P24855 282 aa10.9□□□□□ -0.66
CHD3-210ENST00000479080 GPR6P46095 362 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms