RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 P2RX3P56373 397 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 C9orf152Q5JTZ5 239 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 LHFPL2Q6ZUX7 228 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 RTN4RL2Q86UN3 420 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 BCAS4Q8TDM0 211 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 MYDGFQ969H8 173 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 RCC1LQ96I51 464 aaKnown RBP10.6□□□□□ -0.71
VCL-205ENST00000478896 GSTK1Q9Y2Q3 226 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 PCDHGB5Q9Y5G0 923 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 NOTCH3Q9UM47 2321 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 LEUTXA8MZ59 168 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 OR2F2O95006 317 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 PRKACBP22694 351 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 CDK2P24941 298 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 ERP29P30040 261 aaKnown RBP10.59□□□□□ -0.71
VCL-205ENST00000478896 CEACAM3P40198 252 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 OR3A1P47881 315 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 MTCP1P56278 107 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 CDC42P60953 191 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 EFNB1P98172 346 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 RBM39Q14498 530 aaKnown RBP10.59□□□□□ -0.71
VCL-205ENST00000478896 KPNB1Q14974 876 aaKnown RBP10.59□□□□□ -0.71
VCL-205ENST00000478896 ZNF146Q15072 292 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 TP53I3Q53FA7 332 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 VAX1Q5SQQ9 334 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 BAIAP2L2Q6UXY1 529 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 ZDHHC13Q8IUH4 622 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 RDH10Q8IZV5 341 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 PRSS35Q8N3Z0 413 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 DNAAF1Q8NEP3 725 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 WFDC9Q8NEX5 89 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 UTP4Q969X6 686 aaKnown RBP10.59□□□□□ -0.71
VCL-205ENST00000478896 RFT1Q96AA3 541 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 OPALINQ96PE5 141 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 SEBOXQ9HB31 216 aaPredicted RBP10.59□□□□□ -0.71
VCL-205ENST00000478896 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.59□□□□□ -0.71
VCL-205ENST00000478896 ING3Q9NXR8 418 aa10.59□□□□□ -0.71
VCL-205ENST00000478896 KIAA2026Q5HYC2 2103 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 SH2D7A6NKC9 451 aaPredicted RBP10.58□□□□□ -0.72
VCL-205ENST00000478896 TOR1AO14656 332 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 SH2D1BO14796 132 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 DUS4LO95620 317 aaKnown RBP10.58□□□□□ -0.72
VCL-205ENST00000478896 OR2H2O95918 312 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 ZNF44P15621 663 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 ATF1P18846 271 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 PTGFRP43088 359 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 BDH1Q02338 343 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 SCN1BQ07699 218 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 ATP6AP1Q15904 470 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 DEFB121Q5J5C9 76 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 TMEM244Q5VVB8 128 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 KDM4DQ6B0I6 523 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 OR4D6Q8NGJ1 314 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 DPF1Q92782 380 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 CREB3L1Q96BA8 519 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 ADAT3Q96EY9 351 aaPredicted RBP10.58□□□□□ -0.72
VCL-205ENST00000478896 RBM14Q96PK6 669 aaKnown RBP10.58□□□□□ -0.72
VCL-205ENST00000478896 GABARAPL1Q9H0R8 117 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 NEK6Q9HC98 313 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 TAS2R3Q9NYW6 316 aa10.58□□□□□ -0.72
VCL-205ENST00000478896 IGKV1-9A0A0C4DH69 117 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 K7EIL1 84 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 FASP25445 335 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 MNDAP41218 407 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 KIR3DL2P43630 455 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 OR3A4PP47883 348 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 GLIPR1P48060 266 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 AESQ08117 197 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 PDZK1IP1Q13113 114 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 HLA-DRB5Q30154 266 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 TCTEX1D4Q5JR98 221 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 KRBOX4Q5JUW0 171 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 CCDC144NLQ6NUI1 221 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 C10orf99Q6UWK7 81 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 HEPN1Q6WQI6 88 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 OR5D18Q8NGL1 313 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 RFKQ969G6 155 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 SPSB1Q96BD6 273 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 CIB1Q99828 191 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 RIBC2Q9H4K1 309 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 ZNF286AQ9HBT8 521 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 HMG20AQ9NP66 347 aa10.57□□□□□ -0.72
VCL-205ENST00000478896 M0QZK8 103 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 PRRX1P54821 245 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 ZNF85Q03923 595 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 BNIP1Q12981 228 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 ATXN7L3Q14CW9 347 aaPredicted RBP10.56□□□□□ -0.72
VCL-205ENST00000478896 TPTE2P1Q5T6R2 138 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 UTS2BQ765I0 119 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 AMIGO2Q86SJ2 522 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 OSR2Q8N2R0 312 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 OR51D1Q8NGF3 324 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 OR8J1Q8NGP2 316 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 OR13C3Q8NGS6 347 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 RPEQ96AT9 228 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 FGGYQ96C11 551 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 SLC7A6OSQ96CW6 309 aaPredicted RBP10.56□□□□□ -0.72
VCL-205ENST00000478896 SPACA5Q96QH8 159 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 ZNF649Q9BS31 505 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 GPR61Q9BZJ8 451 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms