RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 UBE2V2Q15819 145 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 RSPO1Q2MKA7 263 aaPredicted RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 KRTAP27-1Q3LI81 207 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 CHRFAM7AQ494W8 412 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 PDSS1Q5T2R2 415 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 ABLIM2Q6H8Q1 611 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 PLXDC2Q6UX71 529 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 CLEC18BQ6UXF7 455 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 TFAP2EQ6VUC0 442 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 GLRX5Q86SX6 157 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 RTN4RL2Q86UN3 420 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF575Q86XF7 245 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 LRRC18Q8N456 261 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 ZIC4Q8N9L1 334 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 RELL2Q8NC24 303 aaPredicted RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 SEMA6DQ8NFY4 1073 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 OR5AP2Q8NGF4 316 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 OR2I1PQ8NGU4 316 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 OR1F12Q8NHA8 337 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 OR2V1Q8NHB1 315 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 LHFPL5Q8TAF8 219 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 PIGTQ969N2 578 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 SGK3Q96BR1 496 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 MRPS24Q96EL2 167 aaKnown RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 C2orf50Q96LR7 162 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 JSRP1Q96MG2 331 aaPredicted RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF75AQ96N20 296 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 GNRHR2Q96P88 292 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 TECTBQ96PL2 329 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 DMRTA2Q96SC8 542 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 RTBDNQ9BSG5 229 aaPredicted RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 SRXN1Q9BYN0 137 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 METTL9Q9H1A3 318 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 WDR13Q9H1Z4 485 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 PIGMQ9H3S5 423 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 RGCCQ9H4X1 137 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 LDAHQ9H6V9 325 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 ELL3Q9HB65 397 aaPredicted RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 BARX1Q9HBU1 254 aaPredicted RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 FSCN3Q9NQT6 498 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 PCDHB16Q9NRJ7 776 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM38BQ9NVV0 291 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 C1orf123Q9NWV4 160 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 SLC39A1Q9NY26 324 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 TAS2R3Q9NYW6 316 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 EHFQ9NZC4 300 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 DNAJB11Q9UBS4 358 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 HSF4Q9ULV5 492 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 CSAG2Q9Y5P2 127 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 CELSR3Q9NYQ7 3312 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 ICE1Q9Y2F5 2266 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 SVILO95425 2214 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 MTORP42345 2549 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ZFHX3Q15911 3703 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 C5orf63A6NC05 138 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 OR6C6A6NF89 314 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF716A6NP11 495 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 G3V3Y1 287 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 LGALS8O00214 317 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 TAAR5O14804 337 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 XRCC2O43543 280 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 SYNGR3O43761 229 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 CSTBP04080 98 aaKnown RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 LCATP04180 440 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 SERPINA5P05154 406 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 TMEM225BP0DP42 221 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 RPS2P15880 293 aaKnown RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF32P17041 273 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ANOS1P23352 680 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 DTYMKP23919 212 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 PTGER4P35408 488 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 RBMXP38159 391 aaKnown RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 PMELP40967 661 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 HTR5AP47898 357 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 RBP2P50120 134 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 MTCP1P56278 107 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 CARD18P57730 90 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 SUPT4H1P63272 117 aaKnown RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 AIMP2Q13155 320 aaKnown RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 SMCO1Q147U7 214 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 RSU1Q15404 277 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 SLC9A3R2Q15599 337 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 STK11Q15831 433 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 TMEM95Q3KNT9 176 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 BEX5Q5H9J7 111 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 FAM74A1Q5RGS3 127 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 DCAF12Q5T6F0 453 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 RIPPLY2Q5TAB7 128 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 AADACL3Q5VUY0 350 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ELP2Q6IA86 826 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 EIF5AL1Q6IS14 154 aaKnown RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 H3F3CQ6NXT2 135 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ASCL4Q6XD76 172 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 ETV3LQ6ZN32 361 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 AAED1Q7RTV5 226 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 C1QL2Q7Z5L3 287 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 PPP1R32Q7Z5V6 425 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 YRDCQ86U90 279 aaKnown RBP4.27□□□□□ -1.73
SF3B6-202ENST00000478050 SGPP2Q8IWX5 399 aa4.27□□□□□ -1.73
SF3B6-202ENST00000478050 BAP18Q8IXM2 172 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms