RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 CFDP00746 253 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-220ENST00000477528 NGFP01138 241 aa12.77□□□□□ -0.37
HDAC6-220ENST00000477528 OR8U8P0C7N1 319 aa12.77□□□□□ -0.37
HDAC6-220ENST00000477528 CFHR1Q03591 330 aa12.77□□□□□ -0.37
HDAC6-220ENST00000477528 RIPPLY2Q5TAB7 128 aa12.77□□□□□ -0.37
HDAC6-220ENST00000477528 OR5A2Q8NGI9 324 aa12.77□□□□□ -0.37
HDAC6-220ENST00000477528 CIB3Q96Q77 187 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-220ENST00000477528 COL4A4P53420 1690 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-220ENST00000477528 M0R1B8 84 aa12.77□□□□□ -0.37
HDAC6-220ENST00000477528 KITLGP21583 273 aa12.77□□□□□ -0.37
HDAC6-220ENST00000477528 OR10V1Q8NGI7 309 aa12.77□□□□□ -0.37
HDAC6-220ENST00000477528 TMEM54Q969K7 222 aa12.77□□□□□ -0.37
HDAC6-220ENST00000477528 H3BP45 60 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 NFYBP25208 207 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 DVL1P1P54792 670 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-220ENST00000477528 LAMTOR1Q6IAA8 161 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 SKA3Q8IX90 412 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 OR10P1Q8NGE3 313 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 SCN8AQ9UQD0 1980 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 SP1P08047 785 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 TESK1Q15569 626 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 GUK1Q16774 197 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 SLC36A1Q7Z2H8 476 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 SLC35G3Q8N808 338 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 GPR27Q9NS67 375 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 GNG13Q9P2W3 67 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 MDC1Q14676 2089 aaKnown RBP12.76□□□□□ -0.37
HDAC6-220ENST00000477528 CYB5BO43169 146 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 LYZL6O75951 148 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 CLPSP04118 112 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 IGFBP3P17936 291 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-220ENST00000477528 P2RY1P47900 373 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 KCNJ3P48549 501 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 RBM11P57052 281 aaKnown RBP12.76□□□□□ -0.37
HDAC6-220ENST00000477528 LCN15Q6UWW0 184 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 TAAR6Q96RI8 345 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 RAB40CQ96S21 281 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 FN3KRPQ9HA64 309 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 GCM1Q9NP62 436 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 RAMP1O60894 148 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 FCGR3AP08637 254 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 ZNF92Q03936 586 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 ZNF660Q6AZW8 331 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-220ENST00000477528 MRPL14Q6P1L8 145 aaKnown RBP12.76□□□□□ -0.37
HDAC6-220ENST00000477528 SLC23A3Q6PIS1 610 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 TBC1D26Q86UD7 250 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 AKR1E2Q96JD6 320 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 DECR2Q9NUI1 292 aa12.76□□□□□ -0.37
HDAC6-220ENST00000477528 A0A087WV48 116 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 TRIM77I1YAP6 450 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 PRRG2O14669 202 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 SHOXO15266 292 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 PDGFBP01127 241 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-220ENST00000477528 ADAM5Q6NVV9 412 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 NANPQ8TBE9 248 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 SRXN1Q9BYN0 137 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 FAM24AA6NFZ4 105 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 RPL36A-HNRNPH2H7BZ11 118 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 CEACAM6P40199 344 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 KCNIP4Q6PIL6 250 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 GFI1Q99684 422 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 AKIRIN1Q9H9L7 192 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-220ENST00000477528 MYOZ1Q9NP98 299 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-220ENST00000477528 KCNMB1Q16558 191 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 HIST2H3PS2Q5TEC6 136 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 SLC7A10Q9NS82 523 aa12.75□□□□□ -0.37
HDAC6-220ENST00000477528 CLEC18AA5D8T8 446 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 TXNL1O43396 289 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 ZNF205O95201 554 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 OR2C1O95371 312 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 NAAAQ02083 359 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 FOXO1Q12778 655 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 SNAI3Q3KNW1 292 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 FADS6Q8N9I5 356 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 CLEC18CQ8NCF0 446 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 OR5C1Q8NGR4 320 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 UBALD1Q8TB05 177 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 DYRK2Q92630 601 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 POMT1Q9Y6A1 747 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 TMEM218A2RU14 115 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 ASCL1P50553 236 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 UNC119Q13432 240 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 ZNF787Q6DD87 383 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 CXorf67Q86X51 503 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-220ENST00000477528 EGLN1Q9GZT9 426 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 GFOD1Q9NXC2 390 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 LPAR3Q9UBY5 353 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 K7ESF4 209 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 SCAF4O95104 1147 aaKnown RBP12.74□□□□□ -0.37
HDAC6-220ENST00000477528 UBE2V2Q15819 145 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 FBXW9Q5XUX1 488 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 LHX4Q969G2 390 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 ERGIC1Q969X5 290 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 J3QT63 122 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 SOX8P57073 446 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 TMEM123Q8N131 208 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 FAM186AA6NE01 2351 aa12.74□□□□□ -0.37
HDAC6-220ENST00000477528 MASP2O00187 686 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms