RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CACNA1DQ01668 2161 aa24.31■■□□□ 1.48
VEGFA-211ENST00000476772 HSPB6O14558 160 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 CFHR2P36980 270 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 SPIN3Q5JUX0 258 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 FIP1L1Q6UN15 594 aaKnown RBP24.3■■□□□ 1.48
VEGFA-211ENST00000476772 DEDD2Q8WXF8 326 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 SNAPC3Q92966 411 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 IFT22Q9H7X7 185 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 ZNF230Q9UIE0 474 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-211ENST00000476772 KMT2BQ9UMN6 2715 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-211ENST00000476772 TRAV24A0A0B4J272 114 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 NAP1L6A6NFF2 107 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 SRRM5B3KS81 715 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 ZNF736B4DX44 427 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-211ENST00000476772 DEGS1O15121 323 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 ZNF44P15621 663 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 SWI5Q1ZZU3 235 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 GCSAMQ8N6F7 178 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 SUMF2Q8NBJ7 301 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 DUSP18Q8NEJ0 188 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 SPACA1Q9HBV2 294 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 MCUBQ9NWR8 336 aa24.3■■□□□ 1.48
VEGFA-211ENST00000476772 HS3ST1O14792 307 aa24.29■■□□□ 1.48
VEGFA-211ENST00000476772 TPD52L2O43399 206 aaKnown RBP24.29■■□□□ 1.48
VEGFA-211ENST00000476772 GIFP27352 417 aa24.29■■□□□ 1.48
VEGFA-211ENST00000476772 FAUP35544 74 aaKnown RBP24.29■■□□□ 1.48
VEGFA-211ENST00000476772 CCR6P51684 374 aa24.29■■□□□ 1.48
VEGFA-211ENST00000476772 PLA1AQ53H76 456 aa24.29■■□□□ 1.48
VEGFA-211ENST00000476772 FAM209AQ5JX71 171 aa24.29■■□□□ 1.48
VEGFA-211ENST00000476772 SFRP4Q6FHJ7 346 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-211ENST00000476772 MAFIPQ8WZ33 124 aa24.29■■□□□ 1.48
VEGFA-211ENST00000476772 ZNF701Q9NV72 531 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-211ENST00000476772 OR14J1Q9UGF5 321 aa24.29■■□□□ 1.48
VEGFA-211ENST00000476772 RALYQ9UKM9 306 aaKnown RBP24.29■■□□□ 1.48
VEGFA-211ENST00000476772 PKDREJQ9NTG1 2253 aa24.29■■□□□ 1.48
VEGFA-211ENST00000476772 H3BUI4 141 aa24.28■■□□□ 1.48
VEGFA-211ENST00000476772 OR2H2O95918 312 aa24.28■■□□□ 1.48
VEGFA-211ENST00000476772 NAT1P18440 290 aa24.28■■□□□ 1.48
VEGFA-211ENST00000476772 CEBPDP49716 269 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-211ENST00000476772 MRPS15P82914 257 aaKnown RBP24.28■■□□□ 1.48
VEGFA-211ENST00000476772 TESK1Q15569 626 aa24.28■■□□□ 1.48
VEGFA-211ENST00000476772 SMIM21Q3B7S5 101 aa24.28■■□□□ 1.48
VEGFA-211ENST00000476772 BOLLQ8N9W6 283 aaKnown RBP24.28■■□□□ 1.48
VEGFA-211ENST00000476772 RDH5Q92781 318 aa24.28■■□□□ 1.48
VEGFA-211ENST00000476772 ERGIC1Q969X5 290 aa24.28■■□□□ 1.48
VEGFA-211ENST00000476772 ST6GALNAC5Q9BVH7 336 aa24.28■■□□□ 1.48
VEGFA-211ENST00000476772 MS4A5Q9H3V2 200 aa24.28■■□□□ 1.48
VEGFA-211ENST00000476772 FAM221AA4D161 298 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 MCRIP1C9JLW8 97 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP24.27■■□□□ 1.48
VEGFA-211ENST00000476772 M0QYG6 137 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 SIRPB1O00241 398 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 RAB3DO95716 219 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 HAND1O96004 215 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 CD74P04233 296 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 TNFRSF1AP19438 455 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 HOGA1Q86XE5 327 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 BPIFB2Q8N4F0 458 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 CACNG6Q9BXT2 260 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 DPAGT1Q9H3H5 408 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 RASL12Q9NYN1 266 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 TREM2Q9NZC2 230 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 PLEKHA6Q9Y2H5 1048 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 SH2D1BO14796 132 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 PLET1Q6UQ28 207 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 Q8TCH9 128 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 NEK7Q8TDX7 302 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 DPCDQ9BVM2 203 aaPredicted RBP24.27■■□□□ 1.48
VEGFA-211ENST00000476772 TINAGL1Q9GZM7 467 aaPredicted RBP24.27■■□□□ 1.48
VEGFA-211ENST00000476772 DECR2Q9NUI1 292 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 PPP1R3CQ9UQK1 317 aa24.27■■□□□ 1.48
VEGFA-211ENST00000476772 KNG1P01042 644 aa24.26■■□□□ 1.47
VEGFA-211ENST00000476772 LHBP01229 141 aa24.26■■□□□ 1.47
VEGFA-211ENST00000476772 FCGR3AP08637 254 aa24.26■■□□□ 1.47
VEGFA-211ENST00000476772 SNRPD2P62316 118 aaKnown RBP24.26■■□□□ 1.47
VEGFA-211ENST00000476772 MEX3BQ6ZN04 569 aaKnown RBP24.26■■□□□ 1.47
VEGFA-211ENST00000476772 OR56B4Q8NH76 319 aa24.26■■□□□ 1.47
VEGFA-211ENST00000476772 EGLN1Q9GZT9 426 aa24.26■■□□□ 1.47
VEGFA-211ENST00000476772 SAP30LQ9HAJ7 183 aa24.26■■□□□ 1.47
VEGFA-211ENST00000476772 RNF7Q9UBF6 113 aa24.26■■□□□ 1.47
VEGFA-211ENST00000476772 ARFGEF3Q5TH69 2177 aa24.25■■□□□ 1.47
VEGFA-211ENST00000476772 SLC33A1O00400 549 aaPredicted RBP24.25■■□□□ 1.47
VEGFA-211ENST00000476772 TGIF2LYQ8IUE0 185 aa24.25■■□□□ 1.47
VEGFA-211ENST00000476772 BEST4Q8NFU0 473 aa24.25■■□□□ 1.47
VEGFA-211ENST00000476772 UPRTQ96BW1 309 aa24.25■■□□□ 1.47
VEGFA-211ENST00000476772 C12orf4Q9NQ89 552 aa24.25■■□□□ 1.47
VEGFA-211ENST00000476772 GLS2Q9UI32 602 aa24.25■■□□□ 1.47
VEGFA-211ENST00000476772 A0A1W2PPR1 153 aa24.24■■□□□ 1.47
VEGFA-211ENST00000476772 CYB5R3P00387 301 aaPredicted RBP24.24■■□□□ 1.47
VEGFA-211ENST00000476772 AMY2BP19961 511 aa24.24■■□□□ 1.47
VEGFA-211ENST00000476772 DTYMKP23919 212 aa24.24■■□□□ 1.47
VEGFA-211ENST00000476772 HRH1P35367 487 aa24.24■■□□□ 1.47
VEGFA-211ENST00000476772 ZNF782Q6ZMW2 699 aaPredicted RBP24.24■■□□□ 1.47
VEGFA-211ENST00000476772 OR11L1Q8NGX0 322 aa24.24■■□□□ 1.47
VEGFA-211ENST00000476772 OR4K15Q8NH41 348 aa24.24■■□□□ 1.47
VEGFA-211ENST00000476772 NPTNQ9Y639 398 aa24.24■■□□□ 1.47
VEGFA-211ENST00000476772 ABCA4P78363 2273 aa24.24■■□□□ 1.47
VEGFA-211ENST00000476772 RFPL4AA6NLU0 287 aa24.24■■□□□ 1.47
VEGFA-211ENST00000476772 RFPL4AL1F8VTS6 287 aa24.24■■□□□ 1.47
VEGFA-211ENST00000476772 TFF1P04155 84 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms