RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 A0A1W2PPE3 182 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 LEUTXA8MZ59 168 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 B2RBV5 119 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 MGST3O14880 152 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 MITFO75030 526 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-219ENST00000476625 OR2H2O95918 312 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 RPLP1P05386 114 aaKnown RBP9.42□□□□□ -0.9
HDAC6-219ENST00000476625 CCL1P22362 96 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 NFYBP25208 207 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 EPHA2P29317 976 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 MYCNOSP40205 109 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 SCN1BQ07699 218 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 ATXN7L3Q14CW9 347 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-219ENST00000476625 LTC4SQ16873 150 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 CASC10Q5T4H9 136 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 CATSPERDQ86XM0 798 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 FAM58AQ8N1B3 248 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 PRSS35Q8N3Z0 413 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 DRAM1Q8N682 238 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 OR5D18Q8NGL1 313 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 CANT1Q8WVQ1 401 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 PLEKHA1Q9HB21 404 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 DNAJB9Q9UBS3 223 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 SLC7A11Q9UPY5 501 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 GSTK1Q9Y2Q3 226 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 UBE2J1Q9Y385 318 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-219ENST00000476625 SNX5Q9Y5X3 404 aa9.42□□□□□ -0.9
HDAC6-219ENST00000476625 TRAV39A0A0B4J263 110 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 A0A1W2PPI3 338 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 SERPINE3A8MV23 424 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 HSPB6O14558 160 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 GNGT2O14610 69 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 SYT7O43581 403 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 RAP2AP10114 183 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 KIR3DL2P43630 455 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 GNG10P50151 68 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 TRIM25Q14258 630 aaKnown RBP9.41□□□□□ -0.9
HDAC6-219ENST00000476625 HES1Q14469 280 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 LCN1P1Q5VSP4 162 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 SLX4IPQ5VYV7 408 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 FAM53AQ6NSI3 398 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-219ENST00000476625 HEPN1Q6WQI6 88 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 YIPF7Q8N8F6 280 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 ZNF596Q8TC21 504 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 ASB17Q8WXJ9 295 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 RNF166Q96A37 237 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-219ENST00000476625 ADAT3Q96EY9 351 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-219ENST00000476625 BORCS8Q96FH0 119 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 MOB1AQ9H8S9 216 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 SCOCQ9UIL1 159 aa9.41□□□□□ -0.9
HDAC6-219ENST00000476625 HYDINQ4G0P3 5121 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 IGHV3-72A0A0B4J1Y9 119 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 TRBV2A0A0J9YWF9 115 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 CCL24O00175 119 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 TOR1AO14656 332 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 E2F6O75461 281 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 NHLRC4P0CG21 123 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-219ENST00000476625 TMEM11P17152 192 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 CD34P28906 385 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 DAPP51397 102 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 FUT6P51993 359 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 CRISP1P54107 249 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 KPNB1Q14974 876 aaKnown RBP9.4□□□□□ -0.9
HDAC6-219ENST00000476625 UNQ9370/PRO34162Q6UXP9 181 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 ZBTB49Q6ZSB9 765 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 MEPCEQ7L2J0 689 aaKnown RBP9.4□□□□□ -0.9
HDAC6-219ENST00000476625 RTN4RL2Q86UN3 420 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 ZNF695Q8IW36 515 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 TCEANCQ8N8B7 351 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 OR10AC1Q8NH08 325 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 TOMM40LQ969M1 308 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 IL4I1Q96RQ9 567 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 LYSTQ99698 3801 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 MCRIP2Q9BUT9 160 aaKnown RBP9.4□□□□□ -0.9
HDAC6-219ENST00000476625 GPR61Q9BZJ8 451 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 CHST5Q9GZS9 411 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 GAL3ST2Q9H3Q3 398 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 ZNF581Q9P0T4 197 aa9.4□□□□□ -0.9
HDAC6-219ENST00000476625 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.4□□□□□ -0.9
HDAC6-219ENST00000476625 DNAH1Q9P2D7 4330 aa9.4□□□□□ -0.91
HDAC6-219ENST00000476625 TRGV10A0A0A0MS01 117 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 LOC107986453A0A1B0GWG9 222 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 ODAMA1E959 279 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 FAM90A18PA6NE21 464 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 FAM90A16PA6NEW6 464 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 FAM90A20PA6NIJ5 464 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 FAM90A9PA6NNJ1 464 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 FAM90A12PA8MX19 464 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 FAM90A5PA8MXJ8 464 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 ZNF670-ZNF695F2Z2N8 137 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 C3orf84H3BNL1 204 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 IGKV1D-33P01593 117 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 IGKV1-33P01594 117 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 FAM90A15PP0C7V4 464 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 FAM90A13PP0C7W8 464 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 FAM90A14PP0C7W9 464 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 FAM90A24PP0C7X0 464 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 ERP29P30040 261 aaKnown RBP9.39□□□□□ -0.91
HDAC6-219ENST00000476625 PTGFRP43088 359 aa9.39□□□□□ -0.91
HDAC6-219ENST00000476625 REG1BP48304 166 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms