RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RPS4Y2Q8TD47 263 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 RGP1Q92546 391 aaPredicted RBP13.22□□□□□ -0.29
COL1A1-205ENST00000476387 TMEM106AQ96A25 262 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 GPER1Q99527 375 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 SEBOXQ9HB31 216 aaPredicted RBP13.22□□□□□ -0.29
COL1A1-205ENST00000476387 RHOFQ9HBH0 211 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 HMG20AQ9NP66 347 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 EXOSC4Q9NPD3 245 aaKnown RBP13.22□□□□□ -0.29
COL1A1-205ENST00000476387 TAS2R4Q9NYW5 299 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 GSTK1Q9Y2Q3 226 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 ZNF281Q9Y2X9 895 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 VWFP04275 2813 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 KIAA2026Q5HYC2 2103 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 NOTCH1P46531 2555 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 IGKV1-12A0A0C4DH73 117 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 TMEM82A0PJX8 343 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 SH2D1BO14796 132 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 CLPXO76031 633 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 IGKV1D-12P01611 117 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 CCL3L1P16619 93 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 TAS2R43P59537 309 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 PPP3R1P63098 170 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 SRSF4Q08170 494 aaKnown RBP13.21□□□□□ -0.29
COL1A1-205ENST00000476387 BRICD5Q6PL45 260 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 PNKDQ8N490 385 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 LINC01006Q8NI28 216 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 FBLIM1Q8WUP2 373 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 TFAP2CQ92754 450 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 CHST6Q9GZX3 395 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 HEXA-AS1Q9H8Q6 139 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 PLCXD1Q9NUJ7 323 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 PSORS1C1Q9UIG5 152 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 VPREB3Q9UKI3 123 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 RNF114Q9Y508 228 aa13.21□□□□□ -0.29
COL1A1-205ENST00000476387 hADV38S2A0JD32 116 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 SIRPB1O00241 398 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 TIMM23O14925 209 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 OGG1O15527 345 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 KCNAB3O43448 404 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 LALBAP00709 142 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 PROK1P58294 105 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 ZP1P60852 638 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 MEF2CQ06413 473 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-205ENST00000476387 TAF9Q16594 264 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 RNF144BQ7Z419 303 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 SATL1Q86VE3 508 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 OR5R1Q8NH85 324 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 FAM192AQ9GZU8 254 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 VCX3BQ9H321 246 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 C16orf95Q9H693 158 aa13.2□□□□□ -0.3
COL1A1-205ENST00000476387 SIRT4Q9Y6E7 314 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-205ENST00000476387 M0QZ24 198 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 MGST3O14880 152 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 PSPNO60542 156 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 OR2H2O95918 312 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 RBP4P02753 201 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 ZNF728P0DKX0 622 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 ZNF44P15621 663 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 COX7A1P24310 79 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 BMXP51813 675 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 AQP4P55087 323 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 MIDNQ504T8 468 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 DMKNQ6E0U4 476 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-205ENST00000476387 DHRS7BQ6IAN0 325 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-205ENST00000476387 LAIR2Q6ISS4 152 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 HCP5Q6MZN7 132 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 ZNF529Q6P280 563 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 ZNF782Q6ZMW2 699 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-205ENST00000476387 ZFP41Q8N8Y5 198 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 OR52N4Q8NGI2 321 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 OR51A2Q8NGJ7 313 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 TNFAIP8L1Q8WVP5 186 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 GHSRQ92847 366 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 ZNF714Q96N38 554 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 CKLFQ9UBR5 152 aa13.19□□□□□ -0.3
COL1A1-205ENST00000476387 PNMA8CA0A1B0GUJ8 204 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 MEX3AA1L020 520 aaKnown RBP13.18□□□□□ -0.3
COL1A1-205ENST00000476387 FUOMA2VDF0 154 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 C17orf98A8MV24 154 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 H0YHG0 523 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 H0YJX3 145 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 GABRPO00591 440 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 TSPAN9O75954 239 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 TGFBR2P37173 567 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 OR3A1P47881 315 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 MTNR1BP49286 362 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 LGALS4P56470 323 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 WNT4P56705 351 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 SCN1BQ07699 218 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 RSU1Q15404 277 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 YIF1BQ5BJH7 314 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 DDI2Q5TDH0 399 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 CRIP3Q6Q6R5 217 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 Q6ZSV7 163 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 TRAPPC6BQ86SZ2 158 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 TPRX1Q8N7U7 411 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 CHST4Q8NCG5 386 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 PXT1Q8NFP0 134 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 OR4S1Q8NGB4 309 aa13.18□□□□□ -0.3
COL1A1-205ENST00000476387 OR13C5Q8NGS8 318 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms