RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 TIMP1P01033 207 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 CGAP01215 116 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 MMP7P09237 267 aaPredicted RBP3.36□□□□□ -1.87
LSM2-211ENST00000475835 FAM90A15PP0C7V4 464 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 FAM90A14PP0C7W9 464 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 MALP21145 153 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 FCARP24071 287 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 RPL3P39023 403 aaKnown RBP3.36□□□□□ -1.87
LSM2-211ENST00000475835 CX3CR1P49238 355 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 EFNA5P52803 228 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 TMPRSS3P57727 454 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 NXPH1P58417 271 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 RPL27P61353 136 aaKnown RBP3.36□□□□□ -1.87
LSM2-211ENST00000475835 SLC35B1P78383 322 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 GUCA2AQ02747 115 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 C1DQ13901 141 aaKnown RBP3.36□□□□□ -1.87
LSM2-211ENST00000475835 ELOBQ15370 118 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 SYPL1Q16563 259 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 DCAF4L1Q3SXM0 396 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 C3orf36Q3SXR2 165 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 CLEC12AQ5QGZ9 265 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 GFI1BQ5VTD9 330 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 C1orf189Q5VU69 101 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 LYPLAL1Q5VWZ2 237 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 LYSMD4Q5XG99 296 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 OLFML2AQ68BL7 652 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 PLAG1Q6DJT9 500 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 ZNF474Q6S9Z5 364 aaPredicted RBP3.36□□□□□ -1.87
LSM2-211ENST00000475835 ARL9Q6T311 187 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 UNQ5815/PRO19632Q6UWF5 114 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 SBSNQ6UWP8 590 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 Q6ZSR6 202 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 Q6ZTK2 550 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 C16orf82Q7Z2V1 217 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 MDGA2Q7Z553 956 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 GLCCI1Q86VQ1 547 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 ZNF761Q86XN6 746 aaPredicted RBP3.36□□□□□ -1.87
LSM2-211ENST00000475835 FAM219AQ8IW50 185 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 ZNF440Q8IYI8 595 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 GPR135Q8IZ08 494 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 TMEM123Q8N131 208 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 UMODL1-AS1Q8N2C9 162 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 MUC15Q8N387 334 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 RNF175Q8N4F7 328 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 TOMM5Q8N4H5 51 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 TMEM151AQ8N4L1 468 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 DEFB125Q8N687 156 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 ACVR1CQ8NER5 493 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 GPR32P1Q8NGA4 272 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 LYPD6BQ8NI32 183 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 CNIH3Q8TBE1 160 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 PROKR1Q8TCW9 393 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 SCAMP4Q969E2 229 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 ZG16BQ96DA0 208 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 RTP4Q96DX8 246 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 ZBTB45Q96K62 511 aaPredicted RBP3.36□□□□□ -1.87
LSM2-211ENST00000475835 CCDC140Q96MF4 163 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 OR6C1Q96RD1 312 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 TRIB3Q96RU7 358 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 ZNF670Q9BS34 389 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 NIPSNAP3BQ9BS92 247 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 ABHD6Q9BV23 337 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 SNRNP25Q9BV90 132 aaKnown RBP3.36□□□□□ -1.87
LSM2-211ENST00000475835 LRRC61Q9BV99 259 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 SPANXDQ9BXN6 97 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 EBPLQ9BY08 206 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 GABARAPL3Q9BY60 117 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 DPY30Q9C005 99 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 WDR61Q9GZS3 305 aaKnown RBP3.36□□□□□ -1.87
LSM2-211ENST00000475835 TMEM39BQ9GZU3 492 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 TMEM133Q9H2Q1 129 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 OR51I2Q9H344 312 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 PPDPFQ9H3Y8 114 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 CDCP1Q9H5V8 836 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 TBC1D17Q9HA65 648 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 TMEM9BQ9NQ34 198 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 TMEM74BQ9NUR3 256 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 AIG1Q9NVV5 245 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 FLRT1Q9NZU1 646 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 CCDC167Q9P0B6 97 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 ZNF319Q9P2F9 582 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 FBLN5Q9UBX5 448 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 PLEKHB1Q9UF11 243 aaPredicted RBP3.36□□□□□ -1.87
LSM2-211ENST00000475835 PRSS50Q9UI38 385 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 B9D1Q9UPM9 204 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 FUT9Q9Y231 359 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 NTNG1Q9Y2I2 539 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 PCSK5Q92824 1860 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 PLXNA4Q9HCM2 1894 aa3.36□□□□□ -1.87
LSM2-211ENST00000475835 ANKRD36A6QL64 1941 aa3.35□□□□□ -1.87
LSM2-211ENST00000475835 DENND4CQ5VZ89 1909 aa3.35□□□□□ -1.87
LSM2-211ENST00000475835 A0A1B0GUS0 222 aa3.35□□□□□ -1.87
LSM2-211ENST00000475835 CDC14CA4D256 554 aa3.35□□□□□ -1.87
LSM2-211ENST00000475835 ZNF705FA8MVS1 300 aaPredicted RBP3.35□□□□□ -1.87
LSM2-211ENST00000475835 B5MCH6 92 aa3.35□□□□□ -1.87
LSM2-211ENST00000475835 H3BQ15 152 aa3.35□□□□□ -1.87
LSM2-211ENST00000475835 H7C1C5 153 aa3.35□□□□□ -1.87
LSM2-211ENST00000475835 M0R2Z0 102 aa3.35□□□□□ -1.87
LSM2-211ENST00000475835 SIRPB1O00241 398 aa3.35□□□□□ -1.87
LSM2-211ENST00000475835 NME4O00746 187 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms