RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SATL1Q86VE3 508 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 PARP16Q8N5Y8 322 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 LY6G5BQ8NDX9 201 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 EMG1Q92979 244 aaKnown RBP12.42□□□□□ -0.42
VARS-223ENST00000474643 CPNE2Q96FN4 548 aaPredicted RBP12.42□□□□□ -0.42
VARS-223ENST00000474643 GAFA1Q96PS6 74 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 GPER1Q99527 375 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 MGLLQ99685 303 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 NRIP2Q9BQI9 281 aa12.42□□□□□ -0.42
VARS-223ENST00000474643 METTL8Q9H825 291 aaKnown RBP12.42□□□□□ -0.42
VARS-223ENST00000474643 SIRT4Q9Y6E7 314 aaPredicted RBP12.42□□□□□ -0.42
VARS-223ENST00000474643 hCG_1809904A0A1W2PP81 198 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 A0A1W2PPE2 198 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 A0A1W2PR64 198 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 A0A1W2PRV1 198 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 M0R1W7 72 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 SIGLEC5O15389 551 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 ANGPTL7O43827 346 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 ACAA1P09110 424 aaPredicted RBP12.41□□□□□ -0.42
VARS-223ENST00000474643 CPEP16870 476 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 CELP19835 753 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 GALP22466 123 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 IER3P46695 156 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 CAV3P56539 151 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 DGUOKQ16854 277 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 METAP1DQ6UB28 335 aaPredicted RBP12.41□□□□□ -0.42
VARS-223ENST00000474643 Q8IYB0 196 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 PIP4P2Q8N4L2 257 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 MS4A15Q8N5U1 240 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 OR5D18Q8NGL1 313 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 OR5D13Q8NGL4 314 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 OR13C5Q8NGS8 318 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 RGP1Q92546 391 aaPredicted RBP12.41□□□□□ -0.42
VARS-223ENST00000474643 TMEM106AQ96A25 262 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 OR5M11Q96RB7 305 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 MRPS26Q9BYN8 205 aaKnown RBP12.41□□□□□ -0.42
VARS-223ENST00000474643 TCF7L1Q9HCS4 588 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 TAS2R4Q9NYW5 299 aa12.41□□□□□ -0.42
VARS-223ENST00000474643 TRRAPQ9Y4A5 3859 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 IGKV1D-17A0A075B6S4 117 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 TRBV23-1A0A0A0MS06 115 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 WIPF1O43516 503 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 FCN3O75636 299 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 TMEM225BP0DP42 221 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 PRDX2P32119 198 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 SAA4P35542 130 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 CEBPDP49716 269 aaPredicted RBP12.4□□□□□ -0.42
VARS-223ENST00000474643 SNU13P55769 128 aaKnown RBP12.4□□□□□ -0.42
VARS-223ENST00000474643 YIF1BQ5BJH7 314 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 ZNRF1Q8ND25 227 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 OR5R1Q8NH85 324 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 UFD1Q92890 307 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 FAM234AQ9H0X4 552 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 ELL3Q9HB65 397 aaPredicted RBP12.4□□□□□ -0.42
VARS-223ENST00000474643 MTCH1Q9NZJ7 389 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 ZNRD1Q9P1U0 126 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 CKLFQ9UBR5 152 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.42
VARS-223ENST00000474643 SF3B6Q9Y3B4 125 aaKnown RBP12.4□□□□□ -0.42
VARS-223ENST00000474643 MEGF8Q7Z7M0 2845 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 RNASEK-C17orf49H0YIS7 233 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 HSMCR30P0CW71 290 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 PRKACAP17612 351 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 AMY2BP19961 511 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 BCL3P20749 454 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 MAP2K4P45985 399 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 UBE2E1P51965 193 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 RELBQ01201 579 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 SRSF4Q08170 494 aaKnown RBP12.39□□□□□ -0.43
VARS-223ENST00000474643 PDZK1IP1Q13113 114 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 KISS1Q15726 138 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 Q499Y3 187 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 ZNF561Q8N587 486 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 ASCC1Q8N9N2 400 aaKnown RBP12.39□□□□□ -0.43
VARS-223ENST00000474643 C8orf46Q8TAG6 207 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 PHYHIPQ92561 330 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 MUL1Q969V5 352 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 PGLYRP3Q96LB9 341 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 FAM192AQ9GZU8 254 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 GLS2Q9UI32 602 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 PKD1L1Q8TDX9 2849 aa12.39□□□□□ -0.43
VARS-223ENST00000474643 ALX3O95076 343 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 SMIM18P0DKX4 95 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 CALCBP10092 127 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 DLX1P56177 255 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 LGALS4P56470 323 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 ERVK11-1P61568 191 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 DEFA6Q01524 100 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 MIDNQ504T8 468 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 C1orf122Q6ZSJ8 110 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 FAM58AQ8N1B3 248 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 PNKDQ8N490 385 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 CD177Q8N6Q3 437 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 SDSLQ96GA7 329 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 OR14A2Q96R54 314 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 S100A13Q99584 98 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 HES4Q9HCC6 221 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 RBFOX1Q9NWB1 397 aaKnown RBP12.38□□□□□ -0.43
VARS-223ENST00000474643 ZNF222Q9UK12 451 aa12.38□□□□□ -0.43
VARS-223ENST00000474643 TRBV5-5A0A0J9YX44 114 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms