RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 LRFN3Q9BTN0 628 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 RSRP1Q9BUV0 290 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 RNF126Q9BV68 326 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 RIMS4Q9H426 269 aaPredicted RBP8.38□□□□□ -1.07
USP39-214ENST00000474572 ZNF442Q9H7R0 627 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 SPACA1Q9HBV2 294 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 Q9N2K0 584 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 TUBG2Q9NRH3 451 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 C1orf123Q9NWV4 160 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 RDH8Q9NYR8 311 aa8.38□□□□□ -1.07
USP39-214ENST00000474572 CACNA1HO95180 2353 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 CNTRLQ7Z7A1 2325 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 LRP5LA4QPB2 252 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 C5orf51A6NDU8 294 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 EEF1E1-BLOC1S5C9J1V9 151 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 H0YIZ8 118 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 ADAP1O75689 374 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 NMBP08949 121 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 ZNF728P0DKX0 622 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 GLP1RP43220 463 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 IDH3GP51553 393 aaPredicted RBP8.37□□□□□ -1.07
USP39-214ENST00000474572 RBM39Q14498 530 aaKnown RBP8.37□□□□□ -1.07
USP39-214ENST00000474572 PDCD1Q15116 288 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 EIF2S3LQ2VIR3 472 aaKnown RBP8.37□□□□□ -1.07
USP39-214ENST00000474572 PRSS54Q6PEW0 395 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 HAGHLQ6PII5 290 aaPredicted RBP8.37□□□□□ -1.07
USP39-214ENST00000474572 BRICD5Q6PL45 260 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 SEM1Q6ZVN7 128 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 WDR86Q86TI4 376 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 NAXEQ8NCW5 288 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 OR5M9Q8NGP3 310 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 THAP6Q8TBB0 222 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 SLC25A40Q8TBP6 338 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 ST8SIA2Q92186 375 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 PHYHIPLQ96FC7 376 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 MICU1Q9BPX6 476 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 RTL8AQ9BWD3 113 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 SUCNR1Q9BXA5 334 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 WDR13Q9H1Z4 485 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 NAA60Q9H7X0 242 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 MBD2Q9UBB5 411 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 IL36RNQ9UBH0 155 aa8.37□□□□□ -1.07
USP39-214ENST00000474572 A0A1B0GWJ7 208 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 FAM221AA4D161 298 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 TMEM210A6NLX4 147 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 MPTX1A8MV57 137 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 FAM25EA8MYX2 175 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 C1QTNF9BB2RNN3 333 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 TUSC2O75896 110 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 CTXN2P0C2S0 81 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 PRKACAP17612 351 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 CA6P23280 308 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 FCGR2CP31995 323 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 RBMXP38159 391 aaKnown RBP8.36□□□□□ -1.07
USP39-214ENST00000474572 KCNJ3P48549 501 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 AP2S1P53680 142 aaPredicted RBP8.36□□□□□ -1.07
USP39-214ENST00000474572 UCP2P55851 309 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 RAB14P61106 215 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 RND3P61587 244 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 FOXF2Q12947 444 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 TMEM187Q14656 261 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 LRRC37A5PQ49AS3 106 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 RGS7BPQ6MZT1 257 aaPredicted RBP8.36□□□□□ -1.07
USP39-214ENST00000474572 Q6P435 159 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 Q8IYB0 196 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 C1orf174Q8IYL3 243 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 SLC38A6Q8IZM9 456 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 FAM58AQ8N1B3 248 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 GAPTQ8N292 157 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 RBMXL3Q8N7X1 1067 aaKnown RBP8.36□□□□□ -1.07
USP39-214ENST00000474572 BHLHE23Q8NDY6 225 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 ANGPTL6Q8NI99 470 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 STOML3Q8TAV4 291 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 MRPL30Q8TCC3 161 aaKnown RBP8.36□□□□□ -1.07
USP39-214ENST00000474572 STARD4Q96DR4 205 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 OR10C1Q96KK4 312 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 VRK1Q99986 396 aaPredicted RBP8.36□□□□□ -1.07
USP39-214ENST00000474572 CABLES2Q9BTV7 478 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 OR2J1Q9GZK6 312 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 ZNF71Q9NQZ8 489 aaPredicted RBP8.36□□□□□ -1.07
USP39-214ENST00000474572 PRR13Q9NZ81 148 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 TREM2Q9NZC2 230 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 DNAJB11Q9UBS4 358 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 TUBD1Q9UJT1 453 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 ATP23Q9Y6H3 246 aa8.36□□□□□ -1.07
USP39-214ENST00000474572 TRAV24A0A0B4J272 114 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 TEX13DA0A0J9YY54 714 aaPredicted RBP8.35□□□□□ -1.07
USP39-214ENST00000474572 KIR2DS1A0A191URI9 304 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 C13orf42A0A1B0GVH6 325 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 KANTRA0A1W2PQU2 76 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 WDR1O75083 606 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 RHBDL1O75783 438 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 KNG1P01042 644 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 PPYP01298 95 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 PDGFAP04085 211 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 PGA5P0DJD9 388 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 KITLGP21583 273 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 AADACP22760 399 aa8.35□□□□□ -1.07
USP39-214ENST00000474572 MDH2P40926 338 aaKnown RBP8.35□□□□□ -1.07
USP39-214ENST00000474572 KIR2DS4P43632 304 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms