RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PPIAL4AQ9Y536 164 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 DYSFO75923 2080 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 IGHV3OR15-7A0A075B7D8 119 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 A0A0A6YYD4 124 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 MEIS3P1A6NDR6 274 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 RFPL4AA6NLU0 287 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 RFPL4AL1F8VTS6 287 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 LGALS8O00214 317 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 MFNGO00587 321 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 CA11O75493 328 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 OR2H2O95918 312 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 HLA-DQB1P01920 261 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 DANCRP0C864 163 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 DAOP14920 347 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 AMY2BP19961 511 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 CHATP28329 748 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 CDKN1AP38936 164 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 GDNFP39905 211 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 KCNJ3P48549 501 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 TAS2R19P59542 299 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 ARPC4P59998 168 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 DGCR2P98153 550 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 PDCD1Q15116 288 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 RGS21Q2M5E4 152 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 ZNF260Q3ZCT1 412 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 ACTBL2Q562R1 376 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 SFRP4Q6FHJ7 346 aaPredicted RBP8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 C11orf71Q6IPW1 123 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 SLC36A1Q7Z2H8 476 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 C11orf53Q8IXP5 236 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 MUC20Q8N307 709 aaPredicted RBP8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 GCSAMQ8N6F7 178 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 POC5Q8NA72 575 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 SUMF2Q8NBJ7 301 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 DEFB108BQ8NET1 73 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 OR52I2Q8NH67 350 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 NUDCD2Q8WVJ2 157 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 GCDHQ92947 438 aaPredicted RBP8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 C14orf79Q96F83 325 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 MED30Q96HR3 178 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 FAAP24Q9BTP7 215 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 WDR13Q9H1Z4 485 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 ZNF665Q9H7R5 613 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 BARX1Q9HBU1 254 aaPredicted RBP8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 HES4Q9HCC6 221 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 IL36RNQ9UBH0 155 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 MGAT4AQ9UM21 535 aa8.65□□□□□ -1.02
PRPF38A-202ENST00000474048 TANC2Q9HCD6 1990 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 MYO18BQ8IUG5 2567 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 A0A1W2PQ09 198 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 CLEC18AA5D8T8 446 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 F8VVB4 439 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 F8VWA3 439 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 TMEM178BH3BS89 294 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 PPIHO43447 177 aaKnown RBP8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 NDUFA2O43678 99 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 HPXP02790 462 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 IFNA6P05013 189 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 CSF3P09919 207 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 PRDX2P32119 198 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 PMELP40967 661 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 OR3A3P47888 321 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 EFNA4P52798 201 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 IL13RA1P78552 427 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 MRPS11P82912 194 aaKnown RBP8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 COL10A1Q03692 680 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 GRK1Q15835 563 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 CHRFAM7AQ494W8 412 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 CLEC18BQ6UXF7 455 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 GDPD3Q7L5L3 318 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 MOB1BQ7L9L4 216 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 NLRC3Q7RTR2 1065 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF561Q8N587 486 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 CLEC18CQ8NCF0 446 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 TMEM185AQ8NFB2 350 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 OR5T2Q8NGG2 359 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 OR5D13Q8NGL4 314 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 ENKURQ8TC29 256 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 DEDD2Q8WXF8 326 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 SOSTQ9BQB4 213 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 C7orf50Q9BRJ6 194 aaKnown RBP8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 CHST6Q9GZX3 395 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 PPA2Q9H2U2 334 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 IFT22Q9H7X7 185 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF286AQ9HBT8 521 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 RAB9BQ9NP90 201 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 MCUBQ9NWR8 336 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 ING3Q9NXR8 418 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 KCNIP1Q9NZI2 227 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 AK3Q9UIJ7 227 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 TRAPPC2LQ9UL33 140 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 PCDHB10Q9UN67 800 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 DOPEY1Q5JWR5 2465 aa8.64□□□□□ -1.03
PRPF38A-202ENST00000474048 ICE1Q9Y2F5 2266 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 KIR2DS1A0A191URI9 304 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 TMEM30CPA0ZSE6 113 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 NAP1L6A6NFF2 107 aa8.63□□□□□ -1.03
PRPF38A-202ENST00000474048 ZNF736B4DX44 427 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms