RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 PLAC9Q5JTB6 97 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 LY6G6FQ5SQ64 297 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 SPINK14Q6IE38 97 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ALKAL2Q6UX46 152 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 C17orf107Q6ZR85 190 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 TIPARPQ7Z3E1 657 aaKnown RBP5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 P4HA3Q7Z4N8 544 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 HSD17B13Q7Z5P4 300 aaPredicted RBP5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 MKXQ8IYA7 352 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 FAM185AQ8N0U4 392 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 OSR2Q8N2R0 312 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 OR10K1Q8NGX5 313 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 FNDC9Q8TBE3 224 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ST8SIA2Q92186 375 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 PIGCQ92535 297 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 TCEAL3Q969E4 200 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 PIK3IP1Q96FE7 263 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 SEC22AQ96IW7 307 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 C2orf50Q96LR7 162 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 C1orf147Q96MC9 270 aaPredicted RBP5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 PAPOLGQ9BWT3 736 aaKnown RBP5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 TTTY12Q9BZ98 90 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 WNT5BQ9H1J7 359 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 PLK3Q9H4B4 646 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ZMAT4Q9H898 229 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 CALHM2Q9HA72 323 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 SPACA1Q9HBV2 294 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 C12orf4Q9NQ89 552 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 SDHAF2Q9NX18 166 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ZNF319Q9P2F9 582 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 MBD2Q9UBB5 411 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 DNAJB11Q9UBS4 358 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 ANXA10Q9UJ72 324 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 GPR132Q9UNW8 380 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 CSAG2Q9Y5P2 127 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 KIF26BQ2KJY2 2108 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 REV3LO60673 3130 aa5.08□□□□□ -1.6
ATPAF1-204ENST00000474020 DCHS1Q96JQ0 3298 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 ASCC3Q8N3C0 2202 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 TRAV14DV4A0A0A6YYC5 116 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 hCG_38984A0A1B0GV85 526 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 MFSD2BA6NFX1 497 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 TRAPPC2LH3BP13 241 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 RPL36A-HNRNPH2H7BZ11 118 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 CCSO14618 274 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 NME2P1O60361 137 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 SP1P08047 785 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 ZNF806P0C7X5 589 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 ZNF728P0DKX0 622 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 OR5H8P0DN80 308 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 CD79AP11912 226 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 CD59P13987 128 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 FUT3P21217 361 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 CCNOP22674 350 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 CD40P25942 277 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 MPGP29372 298 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 AVPR2P30518 371 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 LUMP51884 338 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 TMEM50BP56557 158 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 S100A10P60903 97 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 NAAAQ02083 359 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 TGFBR3Q03167 851 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 PDZK1IP1Q13113 114 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 SNTB1Q13884 538 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 SLC10A1Q14973 349 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 CSRP2Q16527 193 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 C2orf68Q2NKX9 166 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 KRTAP27-1Q3LI81 207 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 HES3Q5TGS1 186 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 TMEM42Q69YG0 159 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 PRSS54Q6PEW0 395 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 UQCC3Q6UW78 93 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 CLEC18BQ6UXF7 455 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 UNQ6126/PRO20091Q6UXV3 157 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 TFAP2EQ6VUC0 442 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 ASCL4Q6XD76 172 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 LINC00696Q6ZRV3 163 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 OVCH2Q7RTZ1 564 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 LINC00596Q86U02 117 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 SKA3Q8IX90 412 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 ZDHHC23Q8IYP9 409 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 SAXO1Q8IYX7 474 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 SLC38A6Q8IZM9 456 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 ZNF565Q8N9K5 539 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 ADAD2Q8NCV1 583 aaKnown RBP5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 OR5M9Q8NGP3 310 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 OR13G1Q8NGZ3 307 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 OR51F2Q8NH61 342 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 OR2AE1Q8NHA4 323 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 NEK7Q8TDX7 302 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 ABHD3Q8WU67 409 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 NINJ1Q92982 152 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 SPSB4Q96A44 273 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 ZNF2Q9BSG1 426 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 SOX7Q9BT81 388 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 SUCNR1Q9BXA5 334 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 C1QTNF5Q9BXJ0 243 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 DNTTIP1Q9H147 329 aa5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 RIMS4Q9H426 269 aaPredicted RBP5.07□□□□□ -1.6
ATPAF1-204ENST00000474020 ZNF442Q9H7R0 627 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms