RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
MRPL55-226ENST00000473066 FOXRED1Q96CU9 486 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-226ENST00000473066 FAM192AQ9GZU8 254 aa12.72□□□□□ -0.37
MRPL55-226ENST00000473066 SLITRK2Q9H156 845 aa12.72□□□□□ -0.37
MRPL55-226ENST00000473066 DCLRE1BQ9H816 532 aa12.72□□□□□ -0.37
MRPL55-226ENST00000473066 TAS2R4Q9NYW5 299 aa12.72□□□□□ -0.37
MRPL55-226ENST00000473066 LINC00312Q9Y6C7 94 aa12.72□□□□□ -0.37
MRPL55-226ENST00000473066 IGKV1-12A0A0C4DH73 117 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 MEX3AA1L020 520 aaKnown RBP12.71□□□□□ -0.37
MRPL55-226ENST00000473066 C17orf98A8MV24 154 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 H3BUX3 64 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 MYL12BO14950 172 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 IGKV1D-12P01611 117 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 MTNR1BP49286 362 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 SCN1BQ07699 218 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 TAF9Q16594 264 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 LRRC75BQ2VPJ9 315 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 OLFML2AQ68BL7 652 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 STX19Q8N4C7 294 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 CHST4Q8NCG5 386 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 TNFAIP8L1Q8WVP5 186 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 TMEM106AQ96A25 262 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 SMIM19Q96E16 107 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 BABAM2Q9NXR7 383 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 CNOT2Q9NZN8 540 aaKnown RBP12.71□□□□□ -0.37
MRPL55-226ENST00000473066 ZNF281Q9Y2X9 895 aa12.71□□□□□ -0.37
MRPL55-226ENST00000473066 TRGV10A0A0A0MS01 117 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 CLPSL1A2RUU4 121 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 PSPNO60542 156 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 CLPXO76031 633 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 OR2H2O95918 312 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 ARG1P05089 322 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 IGHV1-8P0DP01 117 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 OR3A1P47881 315 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 P2RX3P56373 397 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 TAS2R43P59537 309 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 ST3GAL4Q11206 333 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 DYNC1I2Q13409 638 aaKnown RBP12.7□□□□□ -0.38
MRPL55-226ENST00000473066 XAF1Q6GPH4 301 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 TPRX1Q8N7U7 411 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 OR4S1Q8NGB4 309 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 OR52N4Q8NGI2 321 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 RPS4Y2Q8TD47 263 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 RGP1Q92546 391 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-226ENST00000473066 S100A13Q99584 98 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 SSX3Q99909 188 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 PPA2Q9H2U2 334 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 GAL3ST2Q9H3Q3 398 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 CKLFQ9UBR5 152 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 TBL2Q9Y4P3 447 aaKnown RBP12.7□□□□□ -0.38
MRPL55-226ENST00000473066 TENM1Q9UKZ4 2725 aa12.7□□□□□ -0.38
MRPL55-226ENST00000473066 GABRPO00591 440 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 ERP29P30040 261 aaKnown RBP12.69□□□□□ -0.38
MRPL55-226ENST00000473066 TGFBR2P37173 567 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 DLX6P56179 175 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 ZP1P60852 638 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 RELBQ01201 579 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 RSU1Q15404 277 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 BRICD5Q6PL45 260 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 AHSA2Q719I0 299 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 C11orf42Q8N5U0 333 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 PXT1Q8NFP0 134 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 WFDC12Q8WWY7 111 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 GGHQ92820 318 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 RAB18Q9NP72 206 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 ABCB10Q9NRK6 738 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 CLEC2DQ9UHP7 191 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 UBE2J1Q9Y385 318 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-226ENST00000473066 RNF114Q9Y508 228 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 SESN1Q9Y6P5 492 aa12.69□□□□□ -0.38
MRPL55-226ENST00000473066 DEGS1O15121 323 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 OGG1O15527 345 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 XPNPEP2O43895 674 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 GNAO1P09471 354 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 BDKRB2P30411 391 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 LY6EQ16553 131 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 AANATQ16613 207 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 DDI2Q5TDH0 399 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 TCF23Q7RTU1 214 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 RNF144BQ7Z419 303 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 BPIFB6Q8NFQ5 453 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 OR51A2Q8NGJ7 313 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 C17orf50Q8WW18 174 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 NR1H4Q96RI1 486 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-226ENST00000473066 MEGF9Q9H1U4 602 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 TMEM138Q9NPI0 162 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 ING3Q9NXR8 418 aa12.68□□□□□ -0.38
MRPL55-226ENST00000473066 CSTBP04080 98 aaKnown RBP12.67□□□□□ -0.38
MRPL55-226ENST00000473066 CSN2P05814 226 aa12.67□□□□□ -0.38
MRPL55-226ENST00000473066 WNT4P56705 351 aa12.67□□□□□ -0.38
MRPL55-226ENST00000473066 SLC34A1Q06495 639 aa12.67□□□□□ -0.38
MRPL55-226ENST00000473066 GABPB1Q06547 395 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-226ENST00000473066 RIPK1Q13546 671 aa12.67□□□□□ -0.38
MRPL55-226ENST00000473066 IL13RA2Q14627 380 aa12.67□□□□□ -0.38
MRPL55-226ENST00000473066 ATXN7L3Q14CW9 347 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-226ENST00000473066 Q499Y3 187 aa12.67□□□□□ -0.38
MRPL55-226ENST00000473066 PAN3Q58A45 887 aaKnown RBP12.67□□□□□ -0.38
MRPL55-226ENST00000473066 YIF1BQ5BJH7 314 aa12.67□□□□□ -0.38
MRPL55-226ENST00000473066 KRBOX4Q5JUW0 171 aa12.67□□□□□ -0.38
MRPL55-226ENST00000473066 ZNF626Q68DY1 528 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms