RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 TSGA10Q9BZW7 698 aa2.18□□□□□ -2.06
CLK1-209ENST00000472679 AQRO60306 1485 aaKnown RBP eCLIP2.18□□□□□ -2.066e-7■■□□□ 11.9
CLK1-209ENST00000472679 A0A1B0GU33 70 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 C17orf51A8MQB3 221 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 ZNF593O00488 134 aaPredicted RBP2.17□□□□□ -2.06
CLK1-209ENST00000472679 PSIP1O75475 530 aaKnown RBP2.17□□□□□ -2.06
CLK1-209ENST00000472679 CRYGCP07315 174 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 UGT2A3Q6UWM9 527 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 GALNT10Q86SR1 603 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 BPIFB6Q8NFQ5 453 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 APOBEC3DQ96AK3 386 aaPredicted RBP2.17□□□□□ -2.06
CLK1-209ENST00000472679 FMC1Q96HJ9 113 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 GAL3ST2Q9H3Q3 398 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 POMKQ9H5K3 350 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 PRORYQ9H606 182 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 TDRD3Q9H7E2 651 aaKnown RBP2.17□□□□□ -2.06
CLK1-209ENST00000472679 RHOFQ9HBH0 211 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 U3KQK5 164 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 NOS1P29475 1434 aa2.17□□□□□ -2.06
CLK1-209ENST00000472679 IGKV1D-37A0A075B6S9 117 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 PSCAO43653 123 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 SOD3P08294 240 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 GZMAP12544 262 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 MLNP12872 115 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 MARCH3Q86UD3 253 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 OR2M3Q8NG83 312 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 OR6K3Q8NGY3 331 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 CACNG8Q8WXS5 425 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 CCL17Q92583 94 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 MAL2Q969L2 176 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 C20orf166-AS1Q96NR2 134 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 HIGD2AQ9BW72 106 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 ANKHQ9HCJ1 492 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 ACOT13Q9NPJ3 140 aa2.16□□□□□ -2.06
CLK1-209ENST00000472679 SAMHD1Q9Y3Z3 626 aaKnown RBP2.16□□□□□ -2.06
CLK1-209ENST00000472679 RBFOX3A6NFN3 312 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 HLA-AP01891 365 aaKnown RBP2.15□□□□□ -2.07
CLK1-209ENST00000472679 CBR1P16152 277 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 CTLA4P16410 223 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 ARR3P36575 388 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 ATP5J2P56134 94 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 WDR43Q15061 677 aaKnown RBP eCLIP2.15□□□□□ -2.07
CLK1-209ENST00000472679 ZNF181Q2M3W8 571 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 ACTBL2Q562R1 376 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 TMEM215Q68D42 235 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 GLYATQ6IB77 296 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 ERICH5Q6P6B1 374 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 TCF24Q7RTU0 167 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 PLEKHA1Q9HB21 404 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 DOCK6Q96HP0 2047 aa2.15□□□□□ -2.07
CLK1-209ENST00000472679 A0A1B0GXF2 115 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 A6NED7 52 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 UPK2O00526 184 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 RFXANKO14593 260 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 PRMT5O14744 637 aaPredicted RBP2.14□□□□□ -2.07
CLK1-209ENST00000472679 SLC31A1O15431 190 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 CD8AP01732 235 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 STAG3L2P0CL84 134 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 GTF2F2P13984 249 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 CNTFRP26992 372 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 CRABP2P29373 138 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 LGALS7P47929 136 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 BNIP2Q12982 314 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 NKAIN1Q4KMZ8 207 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 C6orf183Q5T699 404 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 TPGS1Q6ZTW0 290 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 CYP4Z1Q86W10 505 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 CLHC1Q8NHS4 586 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 RAD51AP1Q96B01 352 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 ULBP1Q9BZM6 244 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 OR5V1Q9UGF6 321 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 SLC22A14Q9Y267 594 aa2.14□□□□□ -2.07
CLK1-209ENST00000472679 OTOGLQ3ZCN5 2332 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 GABRA1P14867 456 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 CPN2P22792 545 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 IL12BP29460 328 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 XKP51811 444 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 CCL23P55773 120 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 GUSBP1Q15486 140 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 BCL2A1Q16548 175 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 HSP90AA4PQ58FG1 418 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 SPNS3Q6ZMD2 512 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 FAM19A1Q7Z5A9 133 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 MSRB3Q8IXL7 192 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 ZNF738Q8NE65 137 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 BLNKQ8WV28 456 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 KLF6Q99612 283 aaPredicted RBP2.13□□□□□ -2.07
CLK1-209ENST00000472679 ANAPC13Q9BS18 74 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 WDR55Q9H6Y2 383 aaPredicted RBP2.13□□□□□ -2.07
CLK1-209ENST00000472679 SDHAF2Q9NX18 166 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 C14orf166Q9Y224 244 aaKnown RBP2.13□□□□□ -2.07
CLK1-209ENST00000472679 FADS3Q9Y5Q0 445 aa2.13□□□□□ -2.07
CLK1-209ENST00000472679 CD300LBA8K4G0 201 aa2.12□□□□□ -2.07
CLK1-209ENST00000472679 ENSAO43768 121 aaKnown RBP2.12□□□□□ -2.07
CLK1-209ENST00000472679 CECR9P0C854 216 aa2.12□□□□□ -2.07
CLK1-209ENST00000472679 SCGB1C2P0DMR2 95 aa2.12□□□□□ -2.07
CLK1-209ENST00000472679 ZNF22P17026 224 aaPredicted RBP2.12□□□□□ -2.07
CLK1-209ENST00000472679 ZNF83P51522 516 aa2.12□□□□□ -2.07
CLK1-209ENST00000472679 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
CLK1-209ENST00000472679 CASP8Q14790 479 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms