RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 PDLIM4P50479 330 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 COL10A1Q03692 680 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 MPV17LQ2QL34 196 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 OLFML2AQ68BL7 652 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 FIP1L1Q6UN15 594 aaKnown RBP16.03■□□□□ 0.16
PSPC1-203ENST00000471658 C6orf201Q7Z4U5 140 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 PEG10Q86TG7 708 aaKnown RBP16.03■□□□□ 0.16
PSPC1-203ENST00000471658 BPIFB2Q8N4F0 458 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 RAB1CQ92928 201 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 ADAM30Q9UKF2 790 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 EDARQ9UNE0 448 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 MRPS7Q9Y2R9 242 aaKnown RBP16.03■□□□□ 0.16
PSPC1-203ENST00000471658 MAB21L2Q9Y586 359 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 ARID1AO14497 2285 aa16.03■□□□□ 0.16
PSPC1-203ENST00000471658 CHRM2P08172 466 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 GNB3P16520 340 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 CHATP28329 748 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 Q6ZTK2 550 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 CCDC190Q86UF4 302 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 GAFA1Q96PS6 74 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 FAAP24Q9BTP7 215 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 NARFLQ9H6Q4 476 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 DIABLOQ9NR28 239 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 GLS2Q9UI32 602 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 KCNK7Q9Y2U2 307 aa16.02■□□□□ 0.16
PSPC1-203ENST00000471658 TMEM82A0PJX8 343 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A10PA6NDY2 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A18PA6NE21 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A16PA6NEW6 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A20PA6NIJ5 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A8PA6NJQ4 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A7PA6NKC0 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A22PA8MWA6 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A12PA8MX19 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A5PA8MXJ8 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A23PA8MXZ1 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 SLC33A1O00400 549 aaPredicted RBP16.01■□□□□ 0.15
PSPC1-203ENST00000471658 XRCC3O43542 346 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 PSPNO60542 156 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 PDCD6O75340 191 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A15PP0C7V4 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A13PP0C7W8 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A14PP0C7W9 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM90A24PP0C7X0 464 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FUT3P21217 361 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 MDH2P40926 338 aaKnown RBP16.01■□□□□ 0.15
PSPC1-203ENST00000471658 TAS2R20P59543 309 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 CDNFQ49AH0 187 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 RAB12Q6IQ22 244 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 ZNF788Q6ZQV5 615 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM216BQ8N7L0 139 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 SUMF2Q8NBJ7 301 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 ZNRF1Q8ND25 227 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 DYRK2Q92630 601 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 PHF21AQ96BD5 680 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 MBD6Q96DN6 1003 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 RAB3CQ96E17 227 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 TIMD4Q96H15 378 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 NEDD4LQ96PU5 975 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 SULT4A1Q9BR01 284 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 PECRQ9BY49 303 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 BPESC1Q9GZL8 116 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 CHST6Q9GZX3 395 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 UBE2QL1A1L167 161 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 HLA-DQB1P01920 261 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 TMEM69Q5SWH9 247 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 C17orf107Q6ZR85 190 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 LINC00596Q86U02 117 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FGFRL1Q8N441 504 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 C10orf105Q8TEF2 133 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 FAM168AQ92567 244 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 GCDHQ92947 438 aaPredicted RBP16.01■□□□□ 0.15
PSPC1-203ENST00000471658 SOSTQ9BQB4 213 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 IFT22Q9H7X7 185 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 MYOZ1Q9NP98 299 aaPredicted RBP16.01■□□□□ 0.15
PSPC1-203ENST00000471658 PLEKHJ1Q9NW61 149 aa16.01■□□□□ 0.15
PSPC1-203ENST00000471658 RCC2Q9P258 522 aaKnown RBP16.01■□□□□ 0.15
PSPC1-203ENST00000471658 A0A0G2JMP0 313 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 A0A0X1KG70 313 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 FABP12A6NFH5 140 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 ADAM20O43506 726 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 FCN3O75636 299 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 LMO1P25800 156 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 GIFP27352 417 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 ZNF260Q3ZCT1 412 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 ATPAF1Q5TC12 328 aaPredicted RBP16■□□□□ 0.15
PSPC1-203ENST00000471658 CLEC2AQ6UVW9 174 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 SNX29P2Q8IUI4 249 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 ASCC1Q8N9N2 400 aaKnown RBP16■□□□□ 0.15
PSPC1-203ENST00000471658 OR4S1Q8NGB4 309 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 OR4M2Q8NGB6 313 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 NINJ1Q92982 152 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 SDSLQ96GA7 329 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 POM121Q96HA1 1249 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 DPCDQ9BVM2 203 aaPredicted RBP16■□□□□ 0.15
PSPC1-203ENST00000471658 PPA2Q9H2U2 334 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 ZNF665Q9H7R5 613 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 ING3Q9NXR8 418 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 CTSZQ9UBR2 303 aa16■□□□□ 0.15
PSPC1-203ENST00000471658 V9GYH0 126 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms