RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ZDHHC16Q969W1 377 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 RNF170Q96K19 258 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 GPER1Q99527 375 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 BARHL1Q9BZE3 327 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 CHIAQ9BZP6 476 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 SLIRPQ9GZT3 109 aaKnown RBP7.51□□□□□ -1.21
SF3A1-206ENST00000471037 PPP1R3EQ9H7J1 279 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 PLGRKTQ9HBL7 147 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 C14orf119Q9NWQ9 140 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 C1RLQ9NZP8 487 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 CLN8Q9UBY8 286 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 STEAP1Q9UHE8 339 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 DAPK2Q9UIK4 370 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 POMT1Q9Y6A1 747 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 A3GALT2U3KPV4 340 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 A0A075B6Q4 140 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 FAM230AA0A1W2PPH8 454 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 CLPSL1A2RUU4 121 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 ZNF732B4DXR9 585 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 C22orf46C9J442 243 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 H0YL77 283 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 TNFRSF13BO14836 293 aaPredicted RBP7.5□□□□□ -1.21
SF3A1-206ENST00000471037 TIMM23O14925 209 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 ENSAO43768 121 aaKnown RBP7.5□□□□□ -1.21
SF3A1-206ENST00000471037 CRYBA1P05813 215 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 MELTFP08582 738 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 UBBP0CG47 229 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 CALCBP10092 127 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 HTR2CP28335 458 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 PMELP40967 661 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 GPM6AP51674 278 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 FGF12P61328 243 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 PDCD1Q15116 288 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 FAM76BQ5HYJ3 339 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 IDNKQ5T6J7 187 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 MZT2AQ6P582 158 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 BRICD5Q6PL45 260 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 ZNF841Q6ZN19 808 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 MOGAT3Q86VF5 341 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 ZNF573Q86YE8 665 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 CELF2-AS1Q8N7Q2 184 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 ZSCAN4Q8NAM6 433 aaPredicted RBP7.5□□□□□ -1.21
SF3A1-206ENST00000471037 MCFD2Q8NI22 146 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 Q8TCH9 128 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 ERGIC1Q969X5 290 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 SPACA5Q96QH8 159 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 NXF2Q9GZY0 626 aaKnown RBP7.5□□□□□ -1.21
SF3A1-206ENST00000471037 CNTD2Q9H8S5 307 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 ABRACLQ9P1F3 81 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 GHRLQ9UBU3 117 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 NOTCH1P46531 2555 aa7.5□□□□□ -1.21
SF3A1-206ENST00000471037 IGKV1-27A0A075B6S5 117 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 F5H5P2 479 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 J3QT63 122 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 PTBP3O95758 552 aaKnown RBP7.49□□□□□ -1.21
SF3A1-206ENST00000471037 BPNT1O95861 308 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 CYB5AP00167 134 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 MMP9P14780 707 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 MPZP25189 248 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 CFHR2P36980 270 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 CD200P41217 278 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 PTGFRP43088 359 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 OR3A4PP47883 348 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 NPY4RP50391 375 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 ZP1P60852 638 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 PDZK1IP1Q13113 114 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 MAB21L1Q13394 359 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 DMRTC1Q5HYR2 192 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 FAM201AQ5SY85 155 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 HES5Q5TA89 166 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 AWAT2Q6E213 333 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 CRIP3Q6Q6R5 217 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 LYPD2Q6UXB3 125 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 PXT1Q8NFP0 134 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 OR4D6Q8NGJ1 314 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 ZNF671Q8TAW3 534 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 TBC1D15Q8TC07 691 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 TNFAIP8L1Q8WVP5 186 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 SSMEM1Q8WWF3 244 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 DYRK2Q92630 601 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 RFT1Q96AA3 541 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 PKIBQ9C010 78 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 FGF23Q9GZV9 251 aaPredicted RBP7.49□□□□□ -1.21
SF3A1-206ENST00000471037 OR51I2Q9H344 312 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 LIN7BQ9HAP6 207 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 SMURF1Q9HCE7 757 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 MRPS28Q9Y2Q9 187 aaKnown RBP7.49□□□□□ -1.21
SF3A1-206ENST00000471037 POLDIP2Q9Y2S7 368 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 ETV7Q9Y603 341 aa7.49□□□□□ -1.21
SF3A1-206ENST00000471037 IGHV3-64DA0A0J9YX35 117 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 CENPVL3A0A0U1RRI6 287 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 ZNF780AO75290 641 aaPredicted RBP7.48□□□□□ -1.21
SF3A1-206ENST00000471037 CLPXO76031 633 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 LIPFP07098 398 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 TMEM225BP0DP42 221 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 SLC2A2P11168 524 aaPredicted RBP7.48□□□□□ -1.21
SF3A1-206ENST00000471037 IRF2P14316 349 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 ARSBP15848 533 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 HAAOP46952 286 aa7.48□□□□□ -1.21
SF3A1-206ENST00000471037 POU3F4P49335 361 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms