RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 ACBD7Q8N6N7 88 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 ZNF676Q8N7Q3 588 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 NKAIN3Q8N8D7 197 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 ASCC1Q8N9N2 400 aaKnown RBP4.73□□□□□ -1.65
VARS-222ENST00000470953 SETD9Q8NE22 299 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 CCDC54Q8NEL0 328 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 OR5A2Q8NGI9 324 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 OR13C3Q8NGS6 347 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 TSEN15Q8WW01 171 aaKnown RBP4.73□□□□□ -1.65
VARS-222ENST00000470953 BORCS8Q96FH0 119 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 HRASLS5Q96KN8 279 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 C4orf36Q96KX1 117 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 WDFY2Q96P53 400 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 ALG8Q9BVK2 526 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 COMMD4Q9H0A8 199 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 TLNRD1Q9H1K6 362 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 WDR13Q9H1Z4 485 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 PPP1R3EQ9H7J1 279 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 SMURF1Q9HCE7 757 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 SERTAD4Q9NUC0 356 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 RHBDL2Q9NX52 303 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 SMPD3Q9NY59 655 aaPredicted RBP4.73□□□□□ -1.65
VARS-222ENST00000470953 OR14J1Q9UGF5 321 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 SCOCQ9UIL1 159 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 SLC22A13Q9Y226 551 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 CAB39Q9Y376 341 aaPredicted RBP4.73□□□□□ -1.65
VARS-222ENST00000470953 FAM96BQ9Y3D0 163 aa4.73□□□□□ -1.65
VARS-222ENST00000470953 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 hCG_1809904A0A1W2PP81 198 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 A0A1W2PPE2 198 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 A0A1W2PR64 198 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 A0A1W2PRV1 198 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 IRGMA1A4Y4 181 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 H0YAE9 185 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 DLGAP1O14490 977 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 SLC16A6O15403 523 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 DEDDO75618 318 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 RHBDL1O75783 438 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 INMTO95050 263 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 HCKP08631 526 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 DBTP11182 482 aaKnown RBP4.72□□□□□ -1.65
VARS-222ENST00000470953 SELLP14151 372 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 GBX2P52951 348 aaPredicted RBP4.72□□□□□ -1.65
VARS-222ENST00000470953 SSTP61278 116 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 SNRPGP62308 76 aaKnown RBP4.72□□□□□ -1.65
VARS-222ENST00000470953 ARF6P62330 175 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 GUCA2AQ02747 115 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 LY6EQ16553 131 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 LRRC36Q1X8D7 754 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 TMEM95Q3KNT9 176 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 TMEM244Q5VVB8 128 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 NCR3LG1Q68D85 454 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 ZNF600Q6ZNG1 722 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 VMO1Q7Z5L0 202 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 CATSPERDQ86XM0 798 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 POC1AQ8NBT0 407 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 PP6455Q8WZ26 134 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 AQP3Q92482 292 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 TFAP2CQ92754 450 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 EMG1Q92979 244 aaKnown RBP4.72□□□□□ -1.65
VARS-222ENST00000470953 SEH1LQ96EE3 360 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 CPNE2Q96FN4 548 aaPredicted RBP4.72□□□□□ -1.65
VARS-222ENST00000470953 RDH12Q96NR8 316 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 MBOAT4Q96T53 435 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 CHST5Q9GZS9 411 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 SIRPDQ9H106 197 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 DNTTIP1Q9H147 329 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 OR51I2Q9H344 312 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 SCPEP1Q9HB40 452 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 ELL3Q9HB65 397 aaPredicted RBP4.72□□□□□ -1.65
VARS-222ENST00000470953 C8orf4Q9NR00 106 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 SIRT7Q9NRC8 400 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 RASL12Q9NYN1 266 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 KAAG1Q9UBP8 84 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 GLS2Q9UI32 602 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 HHLA2Q9UM44 414 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 RPL36Q9Y3U8 105 aaKnown RBP4.72□□□□□ -1.65
VARS-222ENST00000470953 V9GYS6 101 aa4.72□□□□□ -1.65
VARS-222ENST00000470953 TRBV23-1A0A0A0MS06 115 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 LOC100130705A0A1B0GUX0 176 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 A0A1W2PRD5 423 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 A0A1W2PRF3 423 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 A0A1W2PRM7 423 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 PQLC2LA1A4F0 135 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 RFPL4AA6NLU0 287 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 RFPL4AL1F8VTS6 287 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 SIGLEC5O15389 551 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 MAGEB3O15480 346 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 SYNGR1O43759 233 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 CHST1O43916 411 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 FCN3O75636 299 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 TFF1P04155 84 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 DUX4L4P0CJ87 422 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 CCL1P22362 96 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 PAX6P26367 422 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 PEX2P28328 305 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 VEGFCP49767 419 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 ATP1B3P54709 279 aa4.71□□□□□ -1.66
VARS-222ENST00000470953 SNU13P55769 128 aaKnown RBP4.71□□□□□ -1.66
VARS-222ENST00000470953 MTCP1P56278 107 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms