RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	RTN4RL2	Q86UN3	420 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	C1orf87	Q8N0U7	546 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	NUDCD2	Q8WVJ2	157 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	NEU4	Q8WWR8	484 aa	Predicted RBP	7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	DEDD2	Q8WXF8	326 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	SULT4A1	Q9BR01	284 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	OCSTAMP	Q9BR26	566 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	RAB1B	Q9H0U4	201 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	ZMAT3	Q9HA38	289 aa	Known RBP	7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	UBTD1	Q9HAC8	227 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	TAS2R8	Q9NYW2	309 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	ZNF581	Q9P0T4	197 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	KLK11	Q9UBX7	282 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	ZNF107	Q9UII5	783 aa	Predicted RBP	7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	ELF5	Q9UKW6	265 aa	Predicted RBP	7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	TBC1D24	Q9ULP9	559 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	HELZ2	Q9BYK8	2649 aa	Known RBP	7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	ARFGEF3	Q5TH69	2177 aa		7.32	□□□□□ -1.24
HDLBP-233	ENST00000470710	IGHV1-69-2	A0A0G2JMI3	117 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	ANKRD20A5P	A0PJZ0	165 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	RFPL4A	A6NLU0	287 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	POM121C	A8CG34	1229 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	MCRIP1	C9JLW8	97 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	RFPL4AL1	F8VTS6	287 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	TMEM178B	H3BS89	294 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	LGALS8	O00214	317 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	SLC33A1	O00400	549 aa	Predicted RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	FSTL3	O95633	263 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	ECD	O95905	644 aa	Predicted RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	HPX	P02790	462 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	MUC1	P15941	1255 aa	Predicted RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	NAT1	P18440	290 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	DTYMK	P23919	212 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	LMO1	P25800	156 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	DUSP1	P28562	367 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	RCVRN	P35243	200 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	KCNJ3	P48549	501 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	INPP1	P49441	399 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	SNU13	P55769	128 aa	Known RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	DEFA1	P59665	94 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	DEFA3	P59666	94 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	GMFB	P60983	142 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	GUCA2A	Q02747	115 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	DYRK1A	Q13627	763 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	ARFRP1	Q13795	201 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	KLF9	Q13886	244 aa	Predicted RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	RBM39	Q14498	530 aa	Known RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	PDCD1	Q15116	288 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	MICB	Q29980	383 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	RNASE12	Q5GAN4	147 aa	Known RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	ATAD3C	Q5T2N8	411 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	SHE	Q5VZ18	495 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	TEX36	Q5VZQ5	186 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	OLFML2A	Q68BL7	652 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	SP5	Q6BEB4	398 aa	Predicted RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	TRAPPC6B	Q86SZ2	158 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	SUMF2	Q8NBJ7	301 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	VRK1	Q99986	396 aa	Predicted RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	C7orf50	Q9BRJ6	194 aa	Known RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	FAAP24	Q9BTP7	215 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	DPCD	Q9BVM2	203 aa	Predicted RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	CACNG6	Q9BXT2	260 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	CHST6	Q9GZX3	395 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	PLEKHF2	Q9H8W4	249 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	TMEM106B	Q9NUM4	274 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	TREM2	Q9NZC2	230 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	NLK	Q9UBE8	527 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	DNAJB11	Q9UBS4	358 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	LAMP3	Q9UQV4	416 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	WIPI2	Q9Y4P8	454 aa		7.31	□□□□□ -1.24
HDLBP-233	ENST00000470710	CACNA1D	Q01668	2161 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	IGKV1D-17	A0A075B6S4	117 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	TRBV6-6	A0A0A6YYG2	114 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	TRAV38-1	A0A0B4J264	116 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710		A1L4Q6	167 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	OOEP	A6NGQ2	149 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	OR2AT4	A6NND4	320 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	C3orf80	F5H4A9	247 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	OVOL3	O00110	214 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	PLA2G10	O15496	165 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	CYB5R3	P00387	301 aa	Predicted RBP	7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	CSF1	P09603	554 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	PSG2	P11465	335 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	ZNF44	P15621	663 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	PRDX2	P32119	198 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	CD80	P33681	288 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	MDH2	P40926	338 aa	Known RBP	7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	MRPS15	P82914	257 aa	Known RBP	7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	HOXA4	Q00056	320 aa	Predicted RBP	7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	PAX5	Q02548	391 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	RGS21	Q2M5E4	152 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	PAN3	Q58A45	887 aa	Known RBP	7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	ZNF57	Q68EA5	555 aa	Predicted RBP	7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	STUM	Q69YW2	141 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	TGIF2LY	Q8IUE0	185 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	TOMM5	Q8N4H5	51 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	CD177	Q8N6Q3	437 aa		7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	BOLL	Q8N9W6	283 aa	Known RBP	7.3	□□□□□ -1.24
HDLBP-233	ENST00000470710	TMEM229B	Q8NBD8	167 aa		7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms