RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 TRGV5A0A0B4J1U4 118 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 YY2O15391 372 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 SLC25A17O43808 307 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 CISD3P0C7P0 127 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 RPL29P47914 159 aaKnown RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 SULT1A1P50225 295 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 NXPH1P58417 271 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 EXOSC2Q13868 293 aaKnown RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 SRSF7Q16629 238 aaKnown RBP eCLIP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 MICBQ29980 383 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 PRICKLE4Q2TBC4 344 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 RNFT1Q5M7Z0 435 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 ALKAL2Q6UX46 152 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 MARCH3Q86UD3 253 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 LURAP1LQ8IV03 231 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 NKAIN4Q8IVV8 208 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 TMEM99Q8N816 258 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 NUDCD2Q8WVJ2 157 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 WFIKKN1Q96NZ8 548 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 BARX1Q9HBU1 254 aaPredicted RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 WSB1Q9Y6I7 421 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 A0A1W2PS18 150 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 MEIS3P2A8K0S8 358 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 CDRT15L2A8MXV6 281 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 AP4M1O00189 453 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 CMC4P56277 68 aaPredicted RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 HOGA1Q86XE5 327 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 SHISA5Q8N114 240 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 RNF133Q8WVZ7 376 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 LSM10Q969L4 123 aaKnown RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 VAMP8Q9BV40 100 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 IKZF5Q9H5V7 419 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 SPANXCQ9NY87 97 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 CTSFQ9UBX1 484 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 NPTNQ9Y639 398 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 C9orf170A2RU37 121 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 PLPP3O14495 311 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 RER1O15258 196 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 FRS3O43559 492 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 SELENOFO60613 162 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 VENTXO95231 258 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 PNPP00491 289 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 HSPB1P04792 205 aaKnown RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 MPGP29372 298 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 HOXA6P31267 233 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 MLF1P58340 268 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 FABP9Q0Z7S8 132 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 C1orf100Q5SVJ3 147 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 SP5Q6BEB4 398 aaPredicted RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 MEX3DQ86XN8 651 aaKnown RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 OR4D10Q8NGI6 311 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 ZG16BQ96DA0 208 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 OR10C1Q96KK4 312 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 PECRQ9BY49 303 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 RBKSQ9H477 322 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 ZDHHC11Q9H8X9 412 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 MRPL15Q9P015 296 aaKnown RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 FBLN5Q9UBX5 448 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 ZDHHC8Q9ULC8 765 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 ESPL1Q14674 2120 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 C3orf85A0A1B0GTC6 90 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 FAM90A9PA6NNJ1 464 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 A8MV72 311 aaPredicted RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 MS4A18H0YCH9 400 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 K7EQS6 105 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 SP1P08047 785 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 ORM2P19652 201 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 OR10J1P30954 320 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 SLC38A11Q08AI6 406 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 TCTN1Q2MV58 587 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 HFEQ30201 348 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 MS4A18Q3C1V0 323 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 OR51E1Q8TCB6 317 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 MRPL30Q8TCC3 161 aaKnown RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 PPP1R1CQ8WVI7 109 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 PSMG3Q9BT73 122 aaPredicted RBP5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 LINC00470Q9BZP3 86 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 FAM234AQ9H0X4 552 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 NCOR1P1Q9H4R4 102 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 UBTD1Q9HAC8 227 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 NTN4Q9HB63 628 aa5.44□□□□□ -1.54
CCDC144A-212ENST00000470068 WNK1Q9H4A3 2382 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 OTOL1A6NHN0 477 aaPredicted RBP5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 C19orf67A6NJJ6 358 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 J3KTA2 159 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 WDR1O75083 606 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 CTAG2O75638 210 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 TNFRSF1BP20333 461 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 HERPUD1Q15011 391 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 NNATQ16517 81 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 TOR2AQ5JU69 321 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 DNLZQ5SXM8 178 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 ATG4DQ86TL0 474 aaPredicted RBP5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 C1orf162Q8NEQ5 155 aaPredicted RBP5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 ZNF596Q8TC21 504 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 ASB10Q8WXI3 467 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 FBXL17Q9UF56 701 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 ANKRD11Q6UB99 2663 aaPredicted RBP5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 QSER1Q2KHR3 1735 aa5.43□□□□□ -1.54
CCDC144A-212ENST00000470068 SEMA7AO75326 666 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms