RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 ZNF596Q8TC21 504 aa9.75□□□□□ -0.85
COL5A1-207ENST00000469093 TMEM163Q8TC26 289 aa9.75□□□□□ -0.85
COL5A1-207ENST00000469093 CAPSLQ8WWF8 208 aa9.75□□□□□ -0.85
COL5A1-207ENST00000469093 CORO2AQ92828 525 aa9.75□□□□□ -0.85
COL5A1-207ENST00000469093 BORCS8Q96FH0 119 aa9.75□□□□□ -0.85
COL5A1-207ENST00000469093 TBX5Q99593 518 aa9.75□□□□□ -0.85
COL5A1-207ENST00000469093 SLC25A33Q9BSK2 321 aa9.75□□□□□ -0.85
COL5A1-207ENST00000469093 ADI1Q9BV57 179 aa9.75□□□□□ -0.85
COL5A1-207ENST00000469093 PLEKHA1Q9HB21 404 aa9.75□□□□□ -0.85
COL5A1-207ENST00000469093 IGKV1-9A0A0C4DH69 117 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 TRBV2A0A0J9YWF9 115 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 TCRBV3S1A0A5B6 114 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 METTL15A6NJ78 407 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 ZAR1LA6NP61 321 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 LEUTXA8MZ59 168 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 H0YHG0 523 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 ENTPD6O75354 484 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 SULT1C4O75897 302 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 OR2T7P0C7T2 308 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 CDK2P24941 298 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 GDNFP39905 211 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 RBP2P50120 134 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 ATP1B3P54709 279 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 MTCP1P56278 107 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 CDC42P60953 191 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 PRAMEF5Q5TYX0 476 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 C12orf73Q69YU5 71 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 PRSS35Q8N3Z0 413 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 LINC00482Q8N8I6 264 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 CCDC54Q8NEL0 328 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 DNAAF1Q8NEP3 725 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 UTP4Q969X6 686 aaKnown RBP9.74□□□□□ -0.85
COL5A1-207ENST00000469093 C10orf35Q96D05 121 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 PRRG3Q9BZD7 231 aa9.74□□□□□ -0.85
COL5A1-207ENST00000469093 KMT2CQ8NEZ4 4911 aaKnown RBP9.73□□□□□ -0.85
COL5A1-207ENST00000469093 TRGV10A0A0A0MS01 117 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 FAM172BPA6NC97 362 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 LY6LH3BQJ8 138 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 BUB1B-PAK6H3BSN5 160 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 SIRPB1O00241 398 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 CLIC3O95833 236 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 FCGR1AP12314 374 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 PRKACAP17612 351 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 LMO1P25800 156 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 CD34P28906 385 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 GLIPR1P48060 266 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 POU3F4P49335 361 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 SNU13P55769 128 aaKnown RBP9.73□□□□□ -0.85
COL5A1-207ENST00000469093 AESQ08117 197 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 KPNB1Q14974 876 aaKnown RBP9.73□□□□□ -0.85
COL5A1-207ENST00000469093 KHDC1LQ5JSQ8 128 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 SPIN3Q5JUX0 258 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 UTF1Q5T230 341 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 ZFP1Q6P2D0 407 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 MRPL41Q8IXM3 137 aaKnown RBP9.73□□□□□ -0.85
COL5A1-207ENST00000469093 OSR2Q8N2R0 312 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 PP6455Q8WZ26 134 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
COL5A1-207ENST00000469093 ADAT3Q96EY9 351 aaPredicted RBP9.73□□□□□ -0.85
COL5A1-207ENST00000469093 GAL3ST2Q9H3Q3 398 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 ZNF286AQ9HBT8 521 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 HMG20AQ9NP66 347 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 TAS2R3Q9NYW6 316 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 WARS2Q9UGM6 360 aaKnown RBP9.73□□□□□ -0.85
COL5A1-207ENST00000469093 GLS2Q9UI32 602 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 GSTK1Q9Y2Q3 226 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 COL7A1Q02388 2944 aa9.73□□□□□ -0.85
COL5A1-207ENST00000469093 A0A087X0M5 115 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 IGKV1-12A0A0C4DH73 117 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 A0A1B0GX30 115 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 ANKRD65E5RJM6 399 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 M0QZK8 103 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 TOR1AO14656 332 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 SH2D1BO14796 132 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 APOL3O95236 402 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 OR2H2O95918 312 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 CYB5AP00167 134 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 IGKV1D-12P01611 117 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 ATF1P18846 271 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 PRKACBP22694 351 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 KIR3DL2P43630 455 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 ARHGDIBP52566 201 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 PRRX1P54821 245 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 PDZK1IP1Q13113 114 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 HLA-DRB5Q30154 266 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 TPTE2P1Q5T6R2 138 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 ETV3LQ6ZN32 361 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 GID4Q8IVV7 300 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 CREB3L1Q96BA8 519 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 B9D2Q9BPU9 175 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 KRT84Q9NSB2 600 aa9.72□□□□□ -0.85
COL5A1-207ENST00000469093 LOC107986453A0A1B0GWG9 222 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FUOMA2VDF0 154 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 PSMB11A5LHX3 300 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM90A18PA6NE21 464 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM90A16PA6NEW6 464 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM90A20PA6NIJ5 464 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM90A9PA6NNJ1 464 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM90A12PA8MX19 464 aa9.71□□□□□ -0.86
COL5A1-207ENST00000469093 FAM90A5PA8MXJ8 464 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms