RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CD200P41217 278 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 ZNF81P51508 661 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 CD300CQ08708 224 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 ZMYND11Q15326 602 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 CDSNQ15517 529 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 VAX1Q5SQQ9 334 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 NCMAPQ5T1S8 102 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 FIP1L1Q6UN15 594 aaKnown RBP16.07■□□□□ 0.16
SMC4-209ENST00000468653 C12orf4Q9NQ89 552 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 SLC2A8Q9NY64 477 aa16.07■□□□□ 0.16
SMC4-209ENST00000468653 C7orf66A4D0T2 115 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 FAM221AA4D161 298 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 HSPB6O14558 160 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 HS3ST1O14792 307 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 CCNKO75909 580 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 TRAPPC2P0DI81 140 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 TRAPPC2BP0DI82 140 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 ZNF44P15621 663 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 SORDQ00796 357 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 CBX3Q13185 183 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 WDR82Q6UXN9 313 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 GALNT11Q8NCW6 608 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 OR5AP2Q8NGF4 316 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 PLPPR2Q96GM1 343 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 CHMP1AQ9HD42 196 aaPredicted RBP16.06■□□□□ 0.16
SMC4-209ENST00000468653 C1orf123Q9NWV4 160 aa16.06■□□□□ 0.16
SMC4-209ENST00000468653 OR4A8P0C604 315 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 ANXA7P20073 488 aaKnown RBP16.05■□□□□ 0.16
SMC4-209ENST00000468653 GNLYP22749 145 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 ARPC4P59998 168 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 TSPAN5P62079 268 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 SUMF2Q8NBJ7 301 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 OR51J1Q9H342 316 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 GHITMQ9H3K2 345 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 NBEAQ8NFP9 2946 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 BOLA2-SMG1P6H3BVE0 249 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 ADIPOQQ15848 244 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 TMEM17Q86X19 198 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 ARRDC1Q8N5I2 433 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 RDH5Q92781 318 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 MEGF10Q96KG7 1140 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 OR2V2Q96R30 315 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 IFT22Q9H7X7 185 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 HES4Q9HCC6 221 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 EHFQ9NZC4 300 aa16.05■□□□□ 0.16
SMC4-209ENST00000468653 IGKV1D-8A0A087WSZ0 117 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 TUBAL3A6NHL2 446 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 SH2D1BO14796 132 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 GLAP06280 429 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 CD3EP07766 207 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 GLRA1P23415 457 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 TNFSF4P23510 183 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 UQCRFS1P47985 274 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 RRAS2P62070 204 aaPredicted RBP16.04■□□□□ 0.16
SMC4-209ENST00000468653 RBM39Q14498 530 aaKnown RBP16.04■□□□□ 0.16
SMC4-209ENST00000468653 C4orf17Q53FE4 359 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 SPIN3Q5JUX0 258 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 METTL11BQ5VVY1 283 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 Q6P435 159 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 OR13C8Q8NGS7 320 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 DPCDQ9BVM2 203 aaPredicted RBP16.04■□□□□ 0.16
SMC4-209ENST00000468653 MED28Q9H204 178 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 PPA2Q9H2U2 334 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 GLS2Q9UI32 602 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 ANXA10Q9UJ72 324 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 ZDHHC8Q9ULC8 765 aa16.04■□□□□ 0.16
SMC4-209ENST00000468653 DIDO1Q9BTC0 2240 aaKnown RBP16.04■□□□□ 0.16
SMC4-209ENST00000468653 TRAV24A0A0B4J272 114 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.03■□□□□ 0.16
SMC4-209ENST00000468653 TMEM82A0PJX8 343 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 WNT9BO14905 357 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 PTBP3O95758 552 aaKnown RBP16.03■□□□□ 0.16
SMC4-209ENST00000468653 MECP2P51608 486 aaKnown RBP16.03■□□□□ 0.16
SMC4-209ENST00000468653 ZNF146Q15072 292 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 CDK10Q15131 360 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 ST3GAL2Q16842 350 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 LRRC29Q8WV35 223 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 FN3KRPQ9HA64 309 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 ZNF286AQ9HBT8 521 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 GPN1Q9HCN4 374 aaPredicted RBP16.03■□□□□ 0.16
SMC4-209ENST00000468653 ETAA1Q9NY74 926 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 SHISA9B4DS77 424 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 SIRPB1O00241 398 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 SDCBPO00560 298 aaPredicted RBP16.03■□□□□ 0.16
SMC4-209ENST00000468653 OR2H2O95918 312 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 IL5P05113 134 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 TNFAIP6P98066 277 aaPredicted RBP16.03■□□□□ 0.16
SMC4-209ENST00000468653 TLE1Q04724 770 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 GLDNQ6ZMI3 551 aaPredicted RBP16.03■□□□□ 0.16
SMC4-209ENST00000468653 ACP7Q6ZNF0 438 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 TERB2Q8NHR7 220 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 ITLN1Q8WWA0 313 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 WDR13Q9H1Z4 485 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 OR14J1Q9UGF5 321 aa16.03■□□□□ 0.16
SMC4-209ENST00000468653 PLCE1Q9P212 2302 aa16.02■□□□□ 0.16
SMC4-209ENST00000468653 HAND1O96004 215 aa16.02■□□□□ 0.15
SMC4-209ENST00000468653 IGHV1-46P01743 117 aa16.02■□□□□ 0.15
SMC4-209ENST00000468653 SMIM21Q3B7S5 101 aa16.02■□□□□ 0.15
SMC4-209ENST00000468653 PAN3Q58A45 887 aaKnown RBP16.02■□□□□ 0.15
SMC4-209ENST00000468653 OVCH2Q7RTZ1 564 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms