RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 NR2C2APQ86WQ0 139 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 MUC15Q8N387 334 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 CHST4Q8NCG5 386 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 OR5A2Q8NGI9 324 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 OR4D6Q8NGJ1 314 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 OR51F2Q8NH61 342 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ITLN1Q8WWA0 313 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 OR5P3Q8WZ94 311 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 AP3S1Q92572 193 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM46BQ96A09 425 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 SLAMF9Q96A28 289 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 SLC25A46Q96AG3 418 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM3DQ96BQ1 224 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 C10orf35Q96D05 121 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ELMOD3Q96FG2 381 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF488Q96MN9 340 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 DHRS9Q9BPW9 319 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 RTL8AQ9BWD3 113 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 CHST5Q9GZS9 411 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 FGF23Q9GZV9 251 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 SLC22A4Q9H015 551 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 METTL9Q9H1A3 318 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 BANF2Q9H503 90 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 METTL17Q9H7H0 456 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF442Q9H7R0 627 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ABCB9Q9NP78 766 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 CYSLTR2Q9NS75 346 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 DECR2Q9NUI1 292 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 C1orf123Q9NWV4 160 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 PLEKHB1Q9UF11 243 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 LAMP3Q9UQV4 416 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 MRPS28Q9Y2Q9 187 aaKnown RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 MRPS7Q9Y2R9 242 aaKnown RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 MPC1Q9Y5U8 109 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 KLF2Q9Y5W3 355 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 EPG5Q9HCE0 2579 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ZFYVE26Q68DK2 2539 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 HCFC1P51610 2035 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 IGLV3-9A0A075B6K5 115 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 A0A075B6Q4 140 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM272A0A1B0GTI8 110 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 A0A1W2PP11 408 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 A0A1W2PPR1 153 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 PQLC2LA1A4F0 135 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM90A20PA6NIJ5 464 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 CGB1A6NKQ9 187 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 DHRS7CA6NNS2 312 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 C17orf100A8MU93 164 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 LYNX1G3V0Z9 82 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 TRAPPC2LH3BP13 241 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 M0R233 179 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 AIPO00170 330 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SLC17A2O00624 439 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 HS3ST1O14792 307 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 AKR7A2O43488 359 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 RHBDL1O75783 438 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 CLPXO76031 633 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 IGHV1-46P01743 117 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 TK1P04183 234 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 LYNX1P0DP58 116 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 IRF2P14316 349 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 BCL3P20749 454 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 CDKN1AP38936 164 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 PTGFRP43088 359 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 NPBWR2P48146 333 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SRP9P49458 86 aaKnown RBP3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 EFNB2P52799 333 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 ART1P52961 327 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SNRPD2P62316 118 aaKnown RBP3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 CCL8P80075 99 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 MZT1Q08AG7 82 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 PDZK1IP1Q13113 114 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 MAB21L1Q13394 359 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 MPPED2Q15777 294 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 CARTPTQ16568 116 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 ANXA2RQ3ZCQ2 193 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SLC22A6Q4U2R8 563 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 C1orf100Q5SVJ3 147 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 AGAP6Q5VW22 663 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 MOGAT3Q86VF5 341 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF573Q86YE8 665 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 CALHM1Q8IU99 346 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 CROCCP3Q8IVE0 287 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 MKXQ8IYA7 352 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 NKAIN3Q8N8D7 197 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SAMD12Q8N8I0 201 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SPERTQ8NA61 448 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SCCPDHQ8NBX0 429 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 C19orf18Q8NEA5 215 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 DEFB108BQ8NET1 73 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 OR51T1Q8NGJ9 327 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 OR6M1Q8NGM8 313 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 OR6Q1Q8NGQ2 317 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 LGALS14Q8TCE9 139 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 HPSE2Q8WWQ2 592 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 ACOT12Q8WYK0 555 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 DDB2Q92466 427 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 ITFG2Q969R8 447 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 SLC25A28Q96A46 364 aa3.43□□□□□ -1.86
TMEM39A-204ENST00000468545 PHF21AQ96BD5 680 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms