RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SLC16A6O15403 523 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 ATP5HO75947 161 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 CYB5AP00167 134 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 ALPLP05186 524 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 ZNF20P17024 532 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 ERP29P30040 261 aaKnown RBP19.64■□□□□ 0.73
PTCH1-210ENST00000468211 GDNFP39905 211 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 FBLN7Q53RD9 439 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 SPIN3Q5JUX0 258 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 PRAMEF5Q5TYX0 476 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 LHFPL2Q6ZUX7 228 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 TRAPPC6BQ86SZ2 158 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 OR5D18Q8NGL1 313 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 TRUB1Q8WWH5 349 aaKnown RBP19.64■□□□□ 0.73
PTCH1-210ENST00000468211 HRASLS5Q96KN8 279 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 OPALINQ96PE5 141 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 DNAH3Q8TD57 4116 aa19.64■□□□□ 0.73
PTCH1-210ENST00000468211 OR2H2O95918 312 aa19.63■□□□□ 0.73
PTCH1-210ENST00000468211 CD24P25063 80 aa19.63■□□□□ 0.73
PTCH1-210ENST00000468211 ZIK1Q3SY52 487 aaPredicted RBP19.63■□□□□ 0.73
PTCH1-210ENST00000468211 OXLD1Q5BKU9 147 aa19.63■□□□□ 0.73
PTCH1-210ENST00000468211 KCTD20Q7Z5Y7 419 aa19.63■□□□□ 0.73
PTCH1-210ENST00000468211 NDUFA11Q86Y39 141 aa19.63■□□□□ 0.73
PTCH1-210ENST00000468211 OR13C9Q8NGT0 318 aa19.63■□□□□ 0.73
PTCH1-210ENST00000468211 PELI1Q96FA3 418 aa19.63■□□□□ 0.73
PTCH1-210ENST00000468211 UBE2J1Q9Y385 318 aaPredicted RBP19.63■□□□□ 0.73
PTCH1-210ENST00000468211 FAM172BPA6NC97 362 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 OR4C45A6NMZ5 311 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 EI24O14681 340 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 HTR1AP08908 422 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 HTR1DP28221 377 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 GLIPR1P48060 266 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 SNRPGP62308 76 aaKnown RBP19.62■□□□□ 0.73
PTCH1-210ENST00000468211 AESQ08117 197 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 SLC25A30Q5SVS4 291 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 SPSB1Q96BD6 273 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 R3HDM4Q96D70 268 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 OCSTAMPQ9BR26 566 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 EXOSC4Q9NPD3 245 aaKnown RBP19.62■□□□□ 0.73
PTCH1-210ENST00000468211 HHLA2Q9UM44 414 aa19.62■□□□□ 0.73
PTCH1-210ENST00000468211 J3QLW9 94 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 SH2D1BO14796 132 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 KDM4BO94953 1096 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 ZNF19P17023 458 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 CCR9P51686 369 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 EMX1Q04741 257 aaPredicted RBP19.61■□□□□ 0.73
PTCH1-210ENST00000468211 UTF1Q5T230 341 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 Q6ZPA2 131 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 ABHD12Q8N2K0 398 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 OR13C3Q8NGS6 347 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 C4orf36Q96KX1 117 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 COMMD4Q9H0A8 199 aa19.61■□□□□ 0.73
PTCH1-210ENST00000468211 EXOGQ9Y2C4 368 aaKnown RBP19.61■□□□□ 0.73
PTCH1-210ENST00000468211 H3BNX3 289 aa19.6■□□□□ 0.73
PTCH1-210ENST00000468211 CIB2O75838 187 aa19.6■□□□□ 0.73
PTCH1-210ENST00000468211 CDK2P24941 298 aa19.6■□□□□ 0.73
PTCH1-210ENST00000468211 LMO1P25800 156 aa19.6■□□□□ 0.73
PTCH1-210ENST00000468211 VDAC2P45880 294 aaPredicted RBP19.6■□□□□ 0.73
PTCH1-210ENST00000468211 SCN1BQ07699 218 aa19.6■□□□□ 0.73
PTCH1-210ENST00000468211 ARSJQ5FYB0 599 aaPredicted RBP19.6■□□□□ 0.73
PTCH1-210ENST00000468211 Q6P435 159 aa19.6■□□□□ 0.73
PTCH1-210ENST00000468211 ACBD7Q8N6N7 88 aa19.6■□□□□ 0.73
PTCH1-210ENST00000468211 CORO2AQ92828 525 aa19.6■□□□□ 0.73
PTCH1-210ENST00000468211 LGALS12Q96DT0 336 aa19.6■□□□□ 0.73
PTCH1-210ENST00000468211 GLS2Q9UI32 602 aa19.6■□□□□ 0.73
PTCH1-210ENST00000468211 PEX14O75381 377 aa19.59■□□□□ 0.73
PTCH1-210ENST00000468211 MT-ND2P03891 347 aa19.59■□□□□ 0.73
PTCH1-210ENST00000468211 ALKBH1Q13686 389 aaKnown RBP19.59■□□□□ 0.73
PTCH1-210ENST00000468211 HEPN1Q6WQI6 88 aa19.59■□□□□ 0.73
PTCH1-210ENST00000468211 ZBTB49Q6ZSB9 765 aa19.59■□□□□ 0.73
PTCH1-210ENST00000468211 LHFPL3Q86UP9 236 aa19.59■□□□□ 0.73
PTCH1-210ENST00000468211 COQ2Q96H96 371 aa19.59■□□□□ 0.73
PTCH1-210ENST00000468211 ISG20L2Q9H9L3 353 aaKnown RBP19.59■□□□□ 0.73
PTCH1-210ENST00000468211 ZNF286AQ9HBT8 521 aa19.59■□□□□ 0.73
PTCH1-210ENST00000468211 ING3Q9NXR8 418 aa19.59■□□□□ 0.73
PTCH1-210ENST00000468211 DPM3Q9P2X0 92 aa19.59■□□□□ 0.73
PTCH1-210ENST00000468211 TRGV10A0A0A0MS01 117 aa19.58■□□□□ 0.72
PTCH1-210ENST00000468211 IGLV1-47P01700 117 aa19.58■□□□□ 0.72
PTCH1-210ENST00000468211 OCM2P0CE71 109 aa19.58■□□□□ 0.72
PTCH1-210ENST00000468211 OCMP0CE72 109 aaPredicted RBP19.58■□□□□ 0.72
PTCH1-210ENST00000468211 BDH1Q02338 343 aa19.58■□□□□ 0.72
PTCH1-210ENST00000468211 MEDAGQ5VYS4 303 aa19.58■□□□□ 0.72
PTCH1-210ENST00000468211 GAL3ST2Q9H3Q3 398 aa19.58■□□□□ 0.72
PTCH1-210ENST00000468211 MYRFQ9Y2G1 1151 aa19.58■□□□□ 0.72
PTCH1-210ENST00000468211 A0A1W2PRX2 142 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 E9PI62 339 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 SLC33A1O00400 549 aaPredicted RBP19.57■□□□□ 0.72
PTCH1-210ENST00000468211 ZNF44P15621 663 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 GABRB1P18505 474 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 CDK5R1Q15078 307 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 OR4F17Q8NGA8 305 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 OR5AU1Q8NGC0 362 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 OR4F4Q96R69 305 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 ZNF649Q9BS31 505 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 PPIL3Q9H2H8 161 aaKnown RBP19.57■□□□□ 0.72
PTCH1-210ENST00000468211 ZCCHC4Q9H5U6 513 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 NEK6Q9HC98 313 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 TAS2R3Q9NYW6 316 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 ORC6Q9Y5N6 252 aa19.57■□□□□ 0.72
PTCH1-210ENST00000468211 ODAMA1E959 279 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms