RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ALDOBP05062 364 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 ISG15P05161 165 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 OCM2P0CE71 109 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 OCMP0CE72 109 aaPredicted RBP15.38■□□□□ 0.05
COL9A3-206ENST00000466532 HTR1DP28221 377 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 NANOS3P60323 173 aaKnown RBP15.38■□□□□ 0.05
COL9A3-206ENST00000466532 PDZK1IP1Q13113 114 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 IL18R1Q13478 541 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 OXLD1Q5BKU9 147 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 KCTD20Q7Z5Y7 419 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 OR4P4Q8NGL7 312 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 TRUB1Q8WWH5 349 aaKnown RBP15.38■□□□□ 0.05
COL9A3-206ENST00000466532 SPSB1Q96BD6 273 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 RNFT2Q96EX2 444 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 MBOAT4Q96T53 435 aa15.38■□□□□ 0.05
COL9A3-206ENST00000466532 EXOSC4Q9NPD3 245 aaKnown RBP15.38■□□□□ 0.05
COL9A3-206ENST00000466532 ADARB2-AS1A8MUL3 147 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 FAM90A22PA8MWA6 464 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 H3BUI4 141 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 SH2D1BO14796 132 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 OR2H2O95918 312 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 HTR1AP08908 422 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 FBLN7Q53RD9 439 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 PRAMEF5Q5TYX0 476 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 FDX2Q6P4F2 183 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 REC114Q7Z4M0 266 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 GAL3ST2Q9H3Q3 398 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 HHLA2Q9UM44 414 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 NOTCH3Q9UM47 2321 aa15.37■□□□□ 0.05
COL9A3-206ENST00000466532 DNAH3Q8TD57 4116 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 TRGV10A0A0A0MS01 117 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 IGKV1-12A0A0C4DH73 117 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 J3QRE1 110 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 SLC16A6O15403 523 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 CIB2O75838 187 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 IGKV1D-12P01611 117 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 OR52W1Q6IF63 320 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 BAIAP2L2Q6UXY1 529 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 ABHD12Q8N2K0 398 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 OR51A4Q8NGJ6 313 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 OR5D18Q8NGL1 313 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 OR13C3Q8NGS6 347 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 OR10AC1Q8NH08 325 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 SPACA5Q96QH8 159 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 DPM3Q9P2X0 92 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 PCDHGB5Q9Y5G0 923 aa15.36■□□□□ 0.05
COL9A3-206ENST00000466532 FUOMA2VDF0 154 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 FAM172BPA6NC97 362 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 KDM4BO94953 1096 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 CDK2P24941 298 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 CD24P25063 80 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 CCR9P51686 369 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 SCN1BQ07699 218 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 AESQ08117 197 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 Q6ZPA2 131 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 RNF144BQ7Z419 303 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 RTN4RL2Q86UN3 420 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 OR13C9Q8NGT0 318 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 ZNF596Q8TC21 504 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 HRASLS5Q96KN8 279 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 OCSTAMPQ9BR26 566 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 COMMD4Q9H0A8 199 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 NEK6Q9HC98 313 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 ORC6Q9Y5N6 252 aa15.35■□□□□ 0.05
COL9A3-206ENST00000466532 J3QLW9 94 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 PIN1P1O15428 100 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 MT-ND2P03891 347 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 ALPLP05186 524 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 ZNF44P15621 663 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 ZNF19P17023 458 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 BRS3P32247 399 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 GLIPR1P48060 266 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 SNRPGP62308 76 aaKnown RBP15.34■□□□□ 0.05
COL9A3-206ENST00000466532 SLC25A30Q5SVS4 291 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 MEDAGQ5VYS4 303 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 HEPN1Q6WQI6 88 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 C16orf82Q7Z2V1 217 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 OR5AU1Q8NGC0 362 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 CAPSLQ8WWF8 208 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 PYDC1Q8WXC3 89 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 SGCDQ92629 289 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 CORO2AQ92828 525 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 STMN2Q93045 179 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 PELI1Q96FA3 418 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 AKR1E2Q96JD6 320 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 C4orf36Q96KX1 117 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 TAS2R3Q9NYW6 316 aa15.34■□□□□ 0.05
COL9A3-206ENST00000466532 A0A1W2PRX2 142 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 OR4C45A6NMZ5 311 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 EI24O14681 340 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 LMO1P25800 156 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 GDNFP39905 211 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 ARHGDIBP52566 201 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 BDH1Q02338 343 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 ALKBH1Q13686 389 aaKnown RBP15.33■□□□□ 0.04
COL9A3-206ENST00000466532 KPNB1Q14974 876 aaKnown RBP15.33■□□□□ 0.04
COL9A3-206ENST00000466532 ZIK1Q3SY52 487 aaPredicted RBP15.33■□□□□ 0.04
COL9A3-206ENST00000466532 ACBD7Q8N6N7 88 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 MRAPQ8TCY5 172 aa15.33■□□□□ 0.04
COL9A3-206ENST00000466532 ZCCHC4Q9H5U6 513 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms