RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 MOB1AQ9H8S9 216 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 CENPMQ9NSP4 180 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 PTTG2Q9NZH5 202 aa11.83□□□□□ -0.52
HMGXB4-206ENST00000466438 RBMY1BA6NDE4 496 aaKnown RBP11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 RBMY1EA6NEQ0 496 aaKnown RBP11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 TMEM212A6NML5 194 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 PRR32B1ATL7 298 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 MAGEB4O15481 346 aaPredicted RBP11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 NDUFB3O43676 98 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 APOC1P02654 83 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 RBMY1DP0C7P1 496 aaKnown RBP11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 CCR9P51686 369 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 RPS25P62851 125 aaKnown RBP11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 ECH1Q13011 328 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 ALKBH1Q13686 389 aaKnown RBP11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 WDR38Q5JTN6 314 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 OTPQ5XKR4 325 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 FDX2Q6P4F2 183 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 CD200R1LQ6Q8B3 271 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 CFAP77Q6ZQR2 320 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 Q6ZS46 218 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 RPS4Y2Q8TD47 263 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 ATF6BQ99941 703 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 OR51E2Q9H255 320 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 R4GMQ9 66 aa11.82□□□□□ -0.52
HMGXB4-206ENST00000466438 TRDV1A0A1B0GX56 115 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 hCG_1807616A0A1W2PRN6 198 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 VGLL3A8MV65 326 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 E9PI62 339 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 LOC110117498-PIK3R3F6TDL0 507 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 MUC1P15941 1255 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 CA6P23280 308 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 MAPK3P27361 379 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 FGF9P31371 208 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 PSMA6P60900 246 aaKnown RBP11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 VBP1P61758 197 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 LSM3P62310 102 aaKnown RBP11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 HIST1H3AP68431 136 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 IKZF1Q13422 519 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 GK2Q14410 553 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 MICBQ29980 383 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 CCDC92Q53HC0 331 aaPredicted RBP11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 YIF1BQ5BJH7 314 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 LRRC10Q5BKY1 277 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 HIST2H3PS2Q5TEC6 136 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 ZNF826PQ6ZT77 177 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 HIST2H3AQ71DI3 136 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 OR5D13Q8NGL4 314 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 OR5AK2Q8NH90 309 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 H1FXQ92522 213 aaKnown RBP11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 RPL3LQ92901 407 aaKnown RBP11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 TMEM203Q969S6 136 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 PGLYRP3Q96LB9 341 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 ADAT1Q9BUB4 502 aaKnown RBP11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 GTF2A1LQ9UNN4 478 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 RYR1P21817 5038 aa11.81□□□□□ -0.52
HMGXB4-206ENST00000466438 A6NDX4 124 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 NKX6-3A6NJ46 265 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 A6NLC8 198 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 GABRPO00591 440 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 RER1O15258 196 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 GMDSO60547 372 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 NCS1P62166 190 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 ETV3LQ6ZN32 361 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 COLCA1Q6ZS62 124 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 TMEM219Q86XT9 240 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 ZNF676Q8N7Q3 588 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 OR2G2Q8NGZ5 317 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 PHYHIPQ92561 330 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 GHSRQ92847 366 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 SPTSSAQ969W0 71 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 KCTD7Q96MP8 289 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 PITPNC1Q9UKF7 332 aa11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 SIRT4Q9Y6E7 314 aaPredicted RBP11.8□□□□□ -0.52
HMGXB4-206ENST00000466438 TMEM269A0A1B0GVZ9 245 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 ACOD1A6NK06 481 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 GPX5O75715 221 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 GATBO75879 557 aaKnown RBP11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 UBCP0CG48 685 aaKnown RBP11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 SERPINB10P48595 397 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 BLCAPP62952 87 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 FABP5Q01469 135 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 KHDC1LQ5JSQ8 128 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 BCL2L15Q5TBC7 163 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 CENPVQ7Z7K6 275 aaPredicted RBP11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 CATSPERDQ86XM0 798 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 OR51D1Q8NGF3 324 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 OR4X2Q8NGF9 303 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 CITED4Q96RK1 184 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 PRR25Q96S07 402 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 KCNJ15Q99712 375 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 CENPOQ9BU64 300 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 DCSTAMPQ9H295 470 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 SP140LQ9H930 580 aa11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 PNRC2Q9NPJ4 139 aaKnown RBP11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 TXNL4BQ9NX01 149 aaKnown RBP11.79□□□□□ -0.52
HMGXB4-206ENST00000466438 A0A1W2PQ09 198 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 ARL6IP5O75915 188 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 JTBO76095 146 aa11.78□□□□□ -0.52
HMGXB4-206ENST00000466438 GRPP07492 148 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms