RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CYTIPO60759 359 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 NEURL1O76050 574 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 CD80P33681 288 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 AKR1C3P42330 323 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 GFRA1P56159 465 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 PRDX4Q13162 271 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 TMEM164Q5U3C3 297 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 UBALD1Q8TB05 177 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 RHOFQ9HBH0 211 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 EDARQ9UNE0 448 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 NBEAQ8NFP9 2946 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 NME2P1O60361 137 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 MBPP02686 304 aaPredicted RBP14.11□□□□□ -0.15
SLX4-202ENST00000466154 PRH1P02810 166 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 SURF2Q15527 256 aaPredicted RBP14.11□□□□□ -0.15
SLX4-202ENST00000466154 EXTL1Q92935 676 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 MAGT1Q9H0U3 335 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 ZNF732B4DXR9 585 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 RBM11P57052 281 aaKnown RBP14.11□□□□□ -0.15
SLX4-202ENST00000466154 RAB1AP62820 205 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 NSUN5P2Q63ZY6 315 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 FAM122CQ6P4D5 195 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 Q6ZRG5 221 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 SVBPQ8N300 66 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 IL22RA1Q8N6P7 574 aa14.11□□□□□ -0.15
SLX4-202ENST00000466154 SAV1Q9H4B6 383 aaPredicted RBP14.11□□□□□ -0.15
SLX4-202ENST00000466154 HSD17B6O14756 317 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 DNPH1O43598 174 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 C1QL1O75973 258 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 FUT3P21217 361 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 FHITP49789 147 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 TMEM268Q5VZI3 342 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 RDH5Q92781 318 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 FAM173AQ9BQD7 235 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 TTTY12Q9BZ98 90 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 STARD10Q9Y365 291 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 TRAV39A0A0B4J263 110 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 TRIM77I1YAP6 450 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 FAM157CP0CG43 387 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 MUC1P15941 1255 aaPredicted RBP14.1□□□□□ -0.15
SLX4-202ENST00000466154 NFYBP25208 207 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 CAV2P51636 162 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 CLINT1Q14677 625 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 HIKESHIQ53FT3 197 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 LDLRAD3Q86YD5 345 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 C17orf78Q8N4C9 275 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 UBE2J1Q9Y385 318 aaPredicted RBP14.1□□□□□ -0.15
SLX4-202ENST00000466154 TTC28Q96AY4 2481 aa14.1□□□□□ -0.15
SLX4-202ENST00000466154 DEDDO75618 318 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 ACP1P24666 158 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 PPA1Q15181 289 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 IL1F10Q8WWZ1 152 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 HIST1H2AAQ96QV6 131 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 CNOT1A5YKK6 2376 aaKnown RBP14.09□□□□□ -0.15
SLX4-202ENST00000466154 FGF16O43320 207 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 MMP7P09237 267 aaPredicted RBP14.09□□□□□ -0.15
SLX4-202ENST00000466154 SCTP09683 121 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 RPL35P42766 123 aaKnown RBP14.09□□□□□ -0.15
SLX4-202ENST00000466154 NPBWR1P48145 328 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 NHLH2Q02577 135 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 APH1AQ96BI3 265 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 TP53RKQ96S44 253 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 ZNF552Q9H707 407 aaPredicted RBP14.09□□□□□ -0.15
SLX4-202ENST00000466154 ZNF703Q9H7S9 590 aaPredicted RBP14.09□□□□□ -0.15
SLX4-202ENST00000466154 RAB19A4D1S5 217 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 SYNGR1O43759 233 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 LHX2P50458 406 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 NAAAQ02083 359 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 EIF5AL1Q6IS14 154 aaKnown RBP14.09□□□□□ -0.15
SLX4-202ENST00000466154 Q6ZPA2 131 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 TMEM251Q8N6I4 163 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 ZNF565Q8N9K5 539 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 SYT3Q9BQG1 590 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 IER2Q9BTL4 223 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 PCDHB16Q9NRJ7 776 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 UQCC1Q9NVA1 299 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 ABI3Q9P2A4 366 aa14.09□□□□□ -0.15
SLX4-202ENST00000466154 A0A1W2PNU3 283 aaPredicted RBP14.08□□□□□ -0.16
SLX4-202ENST00000466154 OR8U9P0C7N5 309 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 PPT1P50897 306 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 PJVKQ0ZLH3 352 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 TMEM187Q14656 261 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 DCAF10Q5QP82 559 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 RIPPLY2Q5TAB7 128 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 TMPRSS7Q7RTY8 843 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 NUFIP2Q7Z417 695 aaKnown RBP14.08□□□□□ -0.16
SLX4-202ENST00000466154 SLC35G3Q8N808 338 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 OR8U1Q8NH10 309 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 ADAMTS17Q8TE56 1095 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 MMP26Q9NRE1 261 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 HSF4Q9ULV5 492 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 RP1L1Q8IWN7 2480 aaPredicted RBP14.08□□□□□ -0.16
SLX4-202ENST00000466154 LILRA1O75019 489 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 PPYP01298 95 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 PVALBP20472 110 aaPredicted RBP14.08□□□□□ -0.16
SLX4-202ENST00000466154 DTYMKP23919 212 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 ECI1P42126 302 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 FAM76BQ5HYJ3 339 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 CLRN3Q8NCR9 226 aa14.08□□□□□ -0.16
SLX4-202ENST00000466154 GLYATL2Q8WU03 294 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms