RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 BOLA2-SMG1P6H3BVE0 249 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 MFNGO00587 321 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 RAB3DO95716 219 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A15PP0C7V4 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A13PP0C7W8 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A14PP0C7W9 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 FAM90A24PP0C7X0 464 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 SERPINA2P20848 420 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 WNT5AP41221 380 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 CCR6P51684 374 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 RRAS2P62070 204 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-215ENST00000465457 GUCA2AQ02747 115 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 PDZK1IP1Q13113 114 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 METTL11BQ5VVY1 283 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 C11orf71Q6IPW1 123 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 RFPL4BQ6ZWI9 263 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 SSX8Q7RTT4 187 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 GLCCI1Q86VQ1 547 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 C10orf105Q8TEF2 133 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 MSI2Q96DH6 328 aaKnown RBP11.73□□□□□ -0.53
HDAC6-215ENST00000465457 Q96M66 194 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 PRRT1Q99946 306 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 BANF2Q9H503 90 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 ING3Q9NXR8 418 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 SLC2A8Q9NY64 477 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 CISD1Q9NZ45 108 aaKnown RBP11.73□□□□□ -0.53
HDAC6-215ENST00000465457 MRPL15Q9P015 296 aaKnown RBP11.73□□□□□ -0.53
HDAC6-215ENST00000465457 SCP2D1Q9UJQ7 156 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 HSF4Q9ULV5 492 aa11.73□□□□□ -0.53
HDAC6-215ENST00000465457 TRAV6A0A075B6T7 132 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 FOXI3A8MTJ6 420 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-215ENST00000465457 CCL2P13500 99 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 RAC2P15153 192 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 IL32P24001 234 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 PMELP40967 661 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 RAD52P43351 418 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 IDH3GP51553 393 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-215ENST00000465457 RNASE10Q5GAN6 216 aaKnown RBP11.72□□□□□ -0.53
HDAC6-215ENST00000465457 CD276Q5ZPR3 534 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 MKXQ8IYA7 352 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 WDR31Q8NA23 367 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 OR6F1Q8NGZ6 308 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 MS4A3Q96HJ5 214 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 NICN1Q9BSH3 213 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 BCL2L14Q9BZR8 327 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 OR10A4Q9H209 315 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 GPN1Q9HCN4 374 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-215ENST00000465457 KCNS2Q9ULS6 477 aa11.72□□□□□ -0.53
HDAC6-215ENST00000465457 HEATR1Q9H583 2144 aaKnown RBP11.71□□□□□ -0.53
HDAC6-215ENST00000465457 IGKV1-27A0A075B6S5 117 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 A0A0A6YYD4 124 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 NGFP01138 241 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 IGLV1-44P01699 117 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 CD3DP04234 171 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 IL5P05113 134 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 SLC25A16P16260 332 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 GNB3P16520 340 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 NAT1P18440 290 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 BLVRBP30043 206 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-215ENST00000465457 EIF2B2P49770 351 aaKnown RBP11.71□□□□□ -0.53
HDAC6-215ENST00000465457 PPP1CBP62140 327 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 ARFRP1Q13795 201 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 TIMM23BQ5SRD1 257 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 SFRP4Q6FHJ7 346 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-215ENST00000465457 ELP2Q6IA86 826 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 RNF144BQ7Z419 303 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 C1QL2Q7Z5L3 287 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 ZNF573Q86YE8 665 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 OSR2Q8N2R0 312 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 Q8NFD4 153 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 CCDC107Q8WV48 283 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 ST8SIA4Q92187 359 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 FAM168AQ92567 244 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 OCSTAMPQ9BR26 566 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 MED28Q9H204 178 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 GHITMQ9H3K2 345 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 PLK3Q9H4B4 646 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 GPR160Q9UJ42 338 aa11.71□□□□□ -0.53
HDAC6-215ENST00000465457 SNRPGP15A8MWD9 76 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 SOCS1O15524 211 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 HTR3BO95264 441 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 USF1P22415 310 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-215ENST00000465457 UCP2P55851 309 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 TAS2R46P59540 309 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 GNG3P63215 75 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 HLXQ14774 488 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-215ENST00000465457 CARTPTQ16568 116 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 NHLRC3Q5JS37 347 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 PLAC9Q5JTB6 97 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 LINC00596Q86U02 117 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 TCTE3Q8IZS6 198 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 OR51F2Q8NH61 342 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 GIMAP1Q8WWP7 306 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 OR5P3Q8WZ94 311 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 CMBLQ96DG6 245 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 ARHGAP5-AS1Q96IT6 56 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 RNF170Q96K19 258 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 MICU1Q9BPX6 476 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 GINS4Q9BRT9 223 aa11.7□□□□□ -0.54
HDAC6-215ENST00000465457 RTL8AQ9BWD3 113 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms